RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 GIMAP8Q8ND71 665 aaPredicted RBP6.82□□□□□ -1.32
SKP1-208ENST00000521216 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.82□□□□□ -1.32
SKP1-208ENST00000521216 TLR9Q9NR96 1032 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 ZNF277Q9NRM2 450 aaPredicted RBP6.82□□□□□ -1.32
SKP1-208ENST00000521216 RCAN3Q9UKA8 241 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 THRAP3Q9Y2W1 955 aaKnown RBP6.82□□□□□ -1.32
SKP1-208ENST00000521216 LTA4HP09960 611 aaKnown RBP6.81□□□□□ -1.32
SKP1-208ENST00000521216 CR2P20023 1033 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 C5AR1P21730 350 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 CTSSP25774 331 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 RAB27AP51159 221 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 MCL1Q07820 350 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 MALLQ13021 153 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 FZD5Q13467 585 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 ANO4Q32M45 955 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 FAM180AQ6UWF9 173 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 TAS1R1Q7RTX1 841 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
SKP1-208ENST00000521216 MSL3Q8N5Y2 521 aaKnown RBP6.81□□□□□ -1.32
SKP1-208ENST00000521216 SSH1Q8WYL5 1049 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 RIN2Q8WYP3 895 aaPredicted RBP6.81□□□□□ -1.32
SKP1-208ENST00000521216 GNRHR2Q96P88 292 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 GREM2Q9H772 168 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 OAZ3Q9UMX2 235 aa6.81□□□□□ -1.32
SKP1-208ENST00000521216 MATN2O00339 956 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 SLC26A4O43511 780 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 TMEM127O75204 238 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 JUNP05412 331 aaKnown RBP6.8□□□□□ -1.32
SKP1-208ENST00000521216 VSIG10L2P0DP72 767 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 HSP90B1P14625 803 aaKnown RBP6.8□□□□□ -1.32
SKP1-208ENST00000521216 HOXA5P20719 270 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 EPHB4P54760 987 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 EPHB1P54762 984 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 KIF23Q02241 960 aaPredicted RBP6.8□□□□□ -1.32
SKP1-208ENST00000521216 TBC1D10BQ4KMP7 808 aaPredicted RBP6.8□□□□□ -1.32
SKP1-208ENST00000521216 SLFN13Q68D06 897 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 SPOCD1Q6ZMY3 1216 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 SHCBP1Q8NEM2 672 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 GPR156Q8NFN8 814 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 CFHR4Q92496 578 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 PAWRQ96IZ0 340 aaKnown RBP6.8□□□□□ -1.32
SKP1-208ENST00000521216 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 INTUQ9ULD6 942 aa6.8□□□□□ -1.32
SKP1-208ENST00000521216 RPTORQ8N122 1335 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 AKAP10O43572 662 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 IL33O95760 270 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 PLATP00750 562 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 PER3P56645 1201 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 KRT85P78386 507 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 MEF2AQ02078 507 aaPredicted RBP6.79□□□□□ -1.32
SKP1-208ENST00000521216 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 GLB1LQ6UWU2 654 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 LIMS2Q7Z4I7 341 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 OR5M3Q8NGP4 307 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 SNX33Q8WV41 574 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 NRG4Q8WWG1 115 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 RABGGTAQ92696 567 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 DPF2Q92785 391 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 TMEM176AQ96HP8 235 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 GPHA2Q96T91 129 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 SEC61A2Q9H9S3 476 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 RBM12Q9NTZ6 932 aaKnown RBP6.79□□□□□ -1.32
SKP1-208ENST00000521216 ZIM2Q9NZV7 527 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 PPP4R1LQ9P1A2 415 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 SAP30BPQ9UHR5 308 aaKnown RBP6.79□□□□□ -1.32
SKP1-208ENST00000521216 TUBD1Q9UJT1 453 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 ZNF180Q9UJW8 692 aa6.79□□□□□ -1.32
SKP1-208ENST00000521216 UBE2QL1A1L167 161 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 ZSCAN20P17040 1043 aaPredicted RBP6.78□□□□□ -1.32
SKP1-208ENST00000521216 CASRP41180 1078 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 MCAMP43121 646 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 SLC16A1P53985 500 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 DUSP2Q05923 314 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 PIN1Q13526 163 aaPredicted RBP6.78□□□□□ -1.32
SKP1-208ENST00000521216 RIN1Q13671 783 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
SKP1-208ENST00000521216 GAGE13Q4V321 117 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 ZFYVE27Q5T4F4 411 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 THEMISQ8N1K5 641 aaPredicted RBP6.78□□□□□ -1.32
SKP1-208ENST00000521216 MIER2Q8N344 545 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 CPA6Q8N4T0 437 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 OR14A2Q96R54 314 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 UHRF1Q96T88 793 aaPredicted RBP6.78□□□□□ -1.32
SKP1-208ENST00000521216 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 METTL14Q9HCE5 456 aaKnown RBP6.78□□□□□ -1.32
SKP1-208ENST00000521216 EID1Q9Y6B2 187 aa6.78□□□□□ -1.32
SKP1-208ENST00000521216 A0A0G2JLL6 359 aaPredicted RBP6.77□□□□□ -1.33
SKP1-208ENST00000521216 PHF2O75151 1096 aa6.77□□□□□ -1.33
SKP1-208ENST00000521216 HMGB1P09429 215 aaKnown RBP6.77□□□□□ -1.33
SKP1-208ENST00000521216 PF4V1P10720 104 aa6.77□□□□□ -1.33
SKP1-208ENST00000521216 NPEPPSP55786 919 aa6.77□□□□□ -1.33
SKP1-208ENST00000521216 GPR135Q8IZ08 494 aa6.77□□□□□ -1.33
SKP1-208ENST00000521216 CMTM4Q8IZR5 234 aa6.77□□□□□ -1.33
SKP1-208ENST00000521216 ARL8AQ96BM9 186 aa6.77□□□□□ -1.33
SKP1-208ENST00000521216 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms