RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
CLK4-208ENST00000520957 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
CLK4-208ENST00000520957 EIF2AQ9BY44 585 aaKnown RBP13.65□□□□□ -0.22
CLK4-208ENST00000520957 PBX4Q9BYU1 374 aa13.65□□□□□ -0.22
CLK4-208ENST00000520957 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
CLK4-208ENST00000520957 C17orf75Q9HAS0 396 aa13.65□□□□□ -0.22
CLK4-208ENST00000520957 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
CLK4-208ENST00000520957 LCHNA4D1U4 455 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 TBCAO75347 108 aaKnown RBP13.64□□□□□ -0.23
CLK4-208ENST00000520957 ERLIN2O94905 339 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 GJB5O95377 273 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 PRKCBP05771 671 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 MAPTP10636 758 aaKnown RBP13.64□□□□□ -0.23
CLK4-208ENST00000520957 MAPK6Q16659 721 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 HERC4Q5GLZ8 1057 aaPredicted RBP13.64□□□□□ -0.23
CLK4-208ENST00000520957 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 TWF2Q6IBS0 349 aaKnown RBP13.64□□□□□ -0.23
CLK4-208ENST00000520957 KRBA2Q6ZNG9 492 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 CLEC17AQ6ZS10 378 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 CHST12Q9NRB3 414 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
CLK4-208ENST00000520957 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
CLK4-208ENST00000520957 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ACKR2O00590 384 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 EFCAB14O75071 495 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 FGFR1P11362 822 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 CASP5P51878 434 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 EFNA5P52803 228 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 SMTNP53814 917 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ASIC1P78348 528 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 KCNA1Q09470 495 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 PRPF4BQ13523 1007 aaKnown RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ERCC4Q92889 916 aaPredicted RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 LPPQ93052 612 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 SLC9A7Q96T83 725 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 TARS2Q9BW92 718 aaKnown RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 HES2Q9Y543 173 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 A0A0U1RQF3 1178 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 A0A1B0GUA9 196 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 AMPD3Q01432 767 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ECHDC2Q86YB7 292 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 ZBTB45Q96K62 511 aaPredicted RBP13.63□□□□□ -0.23
CLK4-208ENST00000520957 TMEM134Q9H6X4 195 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 PCDHB2Q9Y5E7 798 aa13.63□□□□□ -0.23
CLK4-208ENST00000520957 K7ENM7 598 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 TLL1O43897 1013 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 KLRC4O43908 158 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 MYBP10242 640 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 AFF1P51825 1210 aaKnown RBP13.62□□□□□ -0.23
CLK4-208ENST00000520957 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 COASYQ13057 564 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 CNNM4Q6P4Q7 775 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
CLK4-208ENST00000520957 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
CLK4-208ENST00000520957 ACO2Q99798 780 aaKnown RBP13.62□□□□□ -0.23
CLK4-208ENST00000520957 PYM1Q9BRP8 204 aaKnown RBP13.62□□□□□ -0.23
CLK4-208ENST00000520957 PDZD7Q9H5P4 517 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
CLK4-208ENST00000520957 MAGEF1Q9HAY2 307 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 RNF19AQ9NV58 838 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 TBX20Q9UMR3 447 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 PCDHB7Q9Y5E2 793 aa13.62□□□□□ -0.23
CLK4-208ENST00000520957 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 TISP43B9A030 160 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 DGKIO75912 1065 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 NPTXRO95502 500 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 CA3P07451 260 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 DNAJB2P25686 324 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
CLK4-208ENST00000520957 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 NOTUMQ6P988 496 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 RAD9AQ99638 391 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 STRA6Q9BX79 667 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 LRRC27Q9C0I9 530 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 NKX2-4Q9H2Z4 354 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 C1orf112Q9NSG2 853 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms