RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 NLRP11P59045 1033 aaKnown RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 MRPS6P82932 125 aaKnown RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 MBTD1Q05BQ5 628 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 TMEM62Q0P6H9 643 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 PTK7Q13308 1070 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 ADAM9Q13443 819 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 MYBPC2Q14324 1141 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 KCNJ12Q14500 433 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CCDC40Q4G0X9 1142 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CDKAL1Q5VV42 579 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 ZPBP2Q6X784 338 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 LRRC55Q6ZSA7 311 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 SRGAP1Q7Z6B7 1085 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 SERINC5Q86VE9 423 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 ZNF668Q96K58 619 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CNOT6LQ96LI5 555 aaKnown RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CCDC113Q9H0I3 377 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 SAMSN1Q9NSI8 373 aaKnown RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 PRMT7Q9NVM4 692 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 TRPV2Q9Y5S1 764 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 GRIN2DO15399 1336 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 MROH7Q68CQ1 1323 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CLIC2O15247 247 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 SLC16A3O15427 465 aaKnown RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 EXOC3O60645 756 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CAND2O75155 1236 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 GPR32O75388 356 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 TPM3P06753 285 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 EPB41P11171 864 aaKnown RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 ZNF18P17022 549 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 GARTP22102 1010 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 MATR3P43243 847 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 MTIF2P46199 727 aaKnown RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 GJA8P48165 433 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CRYBB1P53674 252 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 PRPF4BQ13523 1007 aaKnown RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 PCBP1Q15365 356 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 FILIP1LQ4L180 1135 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 HSP90AA4PQ58FG1 418 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CEP135Q66GS9 1140 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 SLFN12LQ6IEE8 588 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 TAS1R3Q7RTX0 852 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CREBRFQ8IUR6 639 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 ZC3H3Q8IXZ2 948 aaKnown RBP9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 ANKLE1Q8NAG6 615 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 SLC43A3Q8NBI5 491 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 POMGNT1Q8WZA1 660 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CTAGE1Q96RT6 745 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 OSMRQ99650 979 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 MCOLN1Q9GZU1 580 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 HSD3B7Q9H2F3 369 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 FZD8Q9H461 694 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 IFT122Q9HBG6 1241 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 ANKFY1Q9P2R3 1169 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 FRMD4BQ9Y2L6 1034 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 EVPLQ92817 2033 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 CNTNAP2Q9UHC6 1331 aa9.8□□□□□ -0.84
CSMD1-208ENST00000520561 ACKR2O00590 384 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 KIAA0391O15091 583 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 CBFA2T2O43439 604 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 CTSHP09668 335 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 ATP1A3P13637 1013 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 DARSP14868 501 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 THPOP40225 353 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 FANCCQ00597 558 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 NCBP1Q09161 790 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 FAM187BQ17R55 369 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 TCP11X2Q5H9J9 407 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 ATF7IP2Q5U623 682 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 CATSPER4Q7RTX7 472 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 FILIP1Q7Z7B0 1213 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 RPAINQ86UA6 219 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 FAM186BQ8IYM0 893 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 XXYLT1Q8NBI6 393 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 EEF2KMTQ96G04 330 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 CBWD1Q9BRT8 395 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 MKNK1Q9BUB5 465 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 TARS2Q9BW92 718 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 CELF4Q9BZC1 486 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 TRIM5Q9C035 493 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 SENP6Q9GZR1 1112 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 IKZF4Q9H2S9 585 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 ADAMTS10Q9H324 1103 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 METTL14Q9HCE5 456 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 TRMT13Q9NUP7 481 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 HSPBP1Q9NZL4 362 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 LIMA1Q9UHB6 759 aaKnown RBP9.79□□□□□ -0.84
CSMD1-208ENST00000520561 CDY2AQ9Y6F7 541 aa9.79□□□□□ -0.84
CSMD1-208ENST00000520561 TISP43B9A030 160 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 ANKRD63C9JTQ0 380 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms