RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PDE2AO00408 941 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 DPYSL4O14531 572 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 ZNF263O14978 683 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 WDR46O15213 610 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 ZNF185O15231 689 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CALUO43852 315 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 GFPT2O94808 682 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 HEXIM1O94992 359 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 TTLL1O95922 423 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CLTBP09497 229 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 PDHBP11177 359 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 RPL13P26373 211 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 SLC1A4P43007 532 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 GNGT1P63211 74 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 EHHADHQ08426 723 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 KLHL30Q0D2K2 578 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 TRAF1Q13077 416 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 RAPGEF1Q13905 1077 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 PPP2R5EQ16537 467 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 SLC18A3Q16572 532 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 ZCWPW2Q504Y3 356 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 NFRKBQ6P4R8 1299 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 LRIG3Q6UXM1 1119 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 KDM7AQ6ZMT4 941 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 DYMQ7RTS9 669 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 RNF180Q86T96 592 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 TADA2BQ86TJ2 420 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 SIAH1Q8IUQ4 282 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CD302Q8IX05 232 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 VTI1AQ96AJ9 217 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 LRRC1Q9BTT6 524 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 METTL14Q9HCE5 456 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 GDF3Q9NR23 364 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 TMEM39AQ9NV64 488 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CTDP1Q9Y5B0 961 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 PCDHGC5Q9Y5F6 944 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 PLXNA1Q9UIW2 1896 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 ADAMTS3O15072 1205 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 SLC16A3O15427 465 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 ERLIN2O94905 339 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 SLC25A27O95847 323 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 CCDC172P0C7W6 258 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 SNHG28P0DPA3 235 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 STAT3P40763 770 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 MATR3P43243 847 aaKnown RBP eCLIP9.38□□□□□ -0.912e-8■■■□□ 16.9
CTNNA1-223ENST00000520520 RPS6KA1Q15418 735 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 SLC35G1Q2M3R5 365 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 ASTE1Q2TB18 679 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 KLHDC7AQ5VTJ3 777 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 RUFY4Q6ZNE9 571 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 FRMD5Q7Z6J6 570 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 ZC3H3Q8IXZ2 948 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 GSPT2Q8IYD1 628 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 CPXCR1Q8N123 301 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 C3orf20Q8ND61 904 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 SPAG5Q96R06 1193 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 TINF2Q9BSI4 451 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 TLR10Q9BXR5 811 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 PLCB1Q9NQ66 1216 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 INTUQ9ULD6 942 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 PARP14Q460N5 1801 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 SMCHD1A6NHR9 2005 aa9.38□□□□□ -0.91
CTNNA1-223ENST00000520520 UBE4BO95155 1302 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 A0A0A6YYK5 440 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 POTEMA6NI47 508 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 AGPSO00116 658 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 PGRMC1O00264 195 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 VWA5AO00534 786 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 NDUFAB1O14561 156 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 TBX3O15119 743 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 ZMYND10O75800 440 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 TDP2O95551 362 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 IGHA2P01877 340 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 AFPP02771 609 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 PLEKP08567 350 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 PLA2G4BP0C869 781 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 AKR1A1P14550 325 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 IRAK1P51617 712 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 USP11P51784 963 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 SMAD3P84022 425 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 FPGSQ05932 587 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 GFPT1Q06210 699 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 ZNF543Q08ER8 600 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 SNX17Q15036 470 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 SNRNP48Q6IEG0 339 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 GPBP1Q86WP2 473 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 RIOX2Q8IUF8 465 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 ABRAQ8N0Z2 381 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 BCAS4Q8TDM0 211 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms