RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 ARL2P36404 184 aa19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 HMGN5P82970 282 aaKnown RBP19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 CAPSQ13938 189 aa19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 MRPL10Q7Z7H8 261 aaKnown RBP19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 ZNF280BQ86YH2 543 aa19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 MRPL43Q8N983 215 aaKnown RBP19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 TMEM169Q96HH4 297 aa19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 ARID2Q68CP9 1835 aa19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 C5orf42Q9H799 3197 aa19.5■□□□□ 0.71
ARFGAP1-213ENST00000520022 B4GALT3O60512 393 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 TSPAN1O60635 241 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 GALTP07902 379 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 ALADP13716 330 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 GLRA2P23416 452 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 RBM25P49756 843 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 TFDP1Q14186 410 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 NBR1Q14596 966 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 SMC1AQ14683 1233 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 TTC38Q5R3I4 469 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 VPS52Q8N1B4 723 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 BCL7CQ8WUZ0 217 aaPredicted RBP19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 AUTS2Q8WXX7 1259 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 EIF2AQ9BY44 585 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 POLR3FQ9H1D9 316 aaPredicted RBP19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 RSAD1Q9HA92 442 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 GPRC5CQ9NQ84 441 aa19.49■□□□□ 0.71
ARFGAP1-213ENST00000520022 C2orf71A6NGG8 1288 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 DDHD2O94830 711 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 POMCP01189 267 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 OR52Z1P0C646 297 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 SLC11A1P49279 550 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 KCNC3Q14003 757 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 NOSTRINQ8IVI9 506 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 SMG8Q8ND04 991 aaKnown RBP19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 URGCPQ8TCY9 931 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 IGSF21Q96ID5 467 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 POP1Q99575 1024 aaKnown RBP19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 TUFT1Q9NNX1 390 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 HES2Q9Y543 173 aa19.48■□□□□ 0.71
ARFGAP1-213ENST00000520022 DCXO43602 365 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 ITGA4P13612 1032 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 NCLP19338 710 aaKnown RBP19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 MBTD1Q05BQ5 628 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 NCBP1Q09161 790 aaKnown RBP19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 ANKRD54Q6NXT1 300 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 POTEGQ6S5H5 508 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 TMEM184AQ6ZMB5 413 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 CDR2LQ86X02 465 aaPredicted RBP19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 RNF135Q8IUD6 432 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 NACC1Q96RE7 527 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 POLR3CQ9BUI4 534 aaPredicted RBP19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 APOL6Q9BWW8 343 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 S1PR5Q9H228 398 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 IPPQ9Y573 584 aa19.47■□□□□ 0.71
ARFGAP1-213ENST00000520022 FSD2A1L4K1 749 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 B4GALT5O43286 388 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 CLASP2O75122 1294 aaKnown RBP19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 SRGAP2BP0DMP2 458 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 AXLP30530 894 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 POU5F1BQ06416 359 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 AMHR2Q16671 573 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 NOTUMQ6P988 496 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 SYCE2Q6PIF2 218 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 DDX53Q86TM3 631 aaKnown RBP19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 IFNLR1Q8IU57 520 aaPredicted RBP19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 C4orf32Q8N8J7 132 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 RSPH1Q8WYR4 309 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 RPGRIP1Q96KN7 1286 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 FAM193BQ96PV7 902 aaPredicted RBP19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 ZBP1Q9H171 429 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 CSRNP2Q9H175 543 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 MUTYHQ9UIF7 546 aa19.46■□□□□ 0.71
ARFGAP1-213ENST00000520022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 LRRIQ4A6NIV6 560 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 ALDH2P05091 517 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 ARF4P18085 180 aaPredicted RBP19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 BMS1Q14692 1282 aaKnown RBP19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 TMEM87AQ8NBN3 555 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 ERMNQ8TAM6 284 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 GAD1Q99259 594 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 VN1R3Q9BXE9 311 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 POLD4Q9HCU8 107 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 KANSL3Q9P2N6 904 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 CDH22Q9UJ99 828 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 DBR1Q9UK59 544 aaKnown RBP19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 NOL7Q9UMY1 257 aaKnown RBP19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 FAN1Q9Y2M0 1017 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 HCFC2Q9Y5Z7 792 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 CNTNAP2Q9UHC6 1331 aa19.45■□□□□ 0.7
ARFGAP1-213ENST00000520022 SSBP05455 408 aaKnown RBP eCLIP19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 RPA1P27694 616 aa19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 TOB1P50616 345 aaPredicted RBP19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 ORC2Q13416 577 aaPredicted RBP19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 RABEP1Q15276 862 aa19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 PCBP1Q15365 356 aaKnown RBP eCLIP19.44■□□□□ 0.75e-12■■■■■ 28.9
ARFGAP1-213ENST00000520022 ECM1Q16610 540 aa19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 PADI6Q6TGC4 694 aa19.44■□□□□ 0.7
ARFGAP1-213ENST00000520022 CNNM3Q8NE01 707 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms