RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 ECHDC2Q86YB7 292 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 MYCT1Q8N699 235 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 MRPS27Q92552 414 aaKnown RBP13.06□□□□□ -0.32
HPS4-218ENST00000519774 RAD9AQ99638 391 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 PARVGQ9HBI0 331 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 USP20Q9Y2K6 914 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 CNTNAP2Q9UHC6 1331 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 A0A1W2PQ27 194 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 A0A1W2PQ64 194 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 A0A1W2PQD8 194 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 K7ENM7 598 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 K7ERI5 159 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 EDN1P05305 212 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 AXLP30530 894 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 HOXA11P31270 313 aaPredicted RBP13.05□□□□□ -0.32
HPS4-218ENST00000519774 GATMP50440 423 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 EFNA5P52803 228 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
HPS4-218ENST00000519774 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
HPS4-218ENST00000519774 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
HPS4-218ENST00000519774 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 CEP57L1Q8IYX8 460 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 PRIMPOLQ96LW4 560 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 FAM161BQ96MY7 647 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
HPS4-218ENST00000519774 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 FZD8Q9H461 694 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 FAM105AQ9NUU6 356 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 TMEM161AQ9NX61 479 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 INSL6Q9Y581 213 aa13.05□□□□□ -0.32
HPS4-218ENST00000519774 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 ACKR2O00590 384 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 TRAK2O60296 914 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 ARHGEF15O94989 841 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 NPTXRO95502 500 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 FGFR1P11362 822 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 SYKP43405 635 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 AFMP43652 599 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 RAB27AP51159 221 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 NDUFA8P51970 172 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 ZNF131P52739 623 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 ASIC1P78348 528 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 AMPD3Q01432 767 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 Q7L0L9 218 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 TAS1R3Q7RTX0 852 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 GRAMD1CQ8IYS0 662 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 LPPQ93052 612 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 DNAJC19Q96DA6 116 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 EIF2AQ9BY44 585 aaKnown RBP13.04□□□□□ -0.32
HPS4-218ENST00000519774 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 LRRC27Q9C0I9 530 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 KBTBD4Q9NVX7 518 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 COL4A6Q14031 1691 aa13.04□□□□□ -0.32
HPS4-218ENST00000519774 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 LINC01553A4QN01 128 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 TBKBP1A7MCY6 615 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 H0YCG3 227 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 N4BP3O15049 544 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 DGKIO75912 1065 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 SKIP12755 728 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 GAP43P17677 238 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 CASP1P29466 404 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 FAM189BP81408 668 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 STRN3Q13033 797 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 BTG3Q14201 252 aaPredicted RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 TRIM6Q9C030 488 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms