RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 TMC5Q6UXY8 1006 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 SRGAP1Q7Z6B7 1085 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 GPR149Q86SP6 731 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 TMEM105Q8N8V8 129 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 PRPF31Q8WWY3 499 aaKnown RBP21.55■■□□□ 1.04
CHMP7-204ENST00000519414 CEP170P1Q96L14 293 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 FAM20AQ96MK3 541 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 KLHL5Q96PQ7 755 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 TMEM175Q9BSA9 504 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 RSAD1Q9HA92 442 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 VAV3Q9UKW4 847 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 CNTNAP2Q9UHC6 1331 aa21.55■■□□□ 1.04
CHMP7-204ENST00000519414 PROB1E7EW31 1015 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 B4GALT3O60512 393 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 DDHD2O94830 711 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 ALDH2P05091 517 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 P4HBP07237 508 aaKnown RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 KLRC2P26717 231 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 RBM25P49756 843 aaKnown RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 CLCN4P51793 760 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 LETM2Q2VYF4 491 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 ASTLQ6HA08 431 aaPredicted RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 PSPC1Q8WXF1 523 aaKnown RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 ACSF2Q96CM8 615 aaPredicted RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 AIFM3Q96NN9 605 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 FAM193BQ96PV7 902 aaPredicted RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 SLKQ9H2G2 1235 aaPredicted RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 MFSD1Q9H3U5 465 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 DHX33Q9H6R0 707 aaKnown RBP21.54■■□□□ 1.04
CHMP7-204ENST00000519414 KCNMB3Q9NPA1 279 aa21.54■■□□□ 1.04
CHMP7-204ENST00000519414 CACNA1HO95180 2353 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 SPDYE4A6NLX3 237 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 LILRB3O75022 631 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 SRGAP2CP0DJJ0 459 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 HOXA11P31270 313 aaPredicted RBP21.53■■□□□ 1.04
CHMP7-204ENST00000519414 RFC5P40937 340 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 PPP4R3AQ6IN85 833 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 CCDC149Q6ZUS6 474 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 OTOP3Q7RTS5 596 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 ZNF579Q8NAF0 562 aaKnown RBP21.53■■□□□ 1.04
CHMP7-204ENST00000519414 MINDY3Q9H8M7 445 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 FAN1Q9Y2M0 1017 aa21.53■■□□□ 1.04
CHMP7-204ENST00000519414 CCDC194A0A1B0GVG4 234 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 SSBP05455 408 aaKnown RBP eCLIP21.52■■□□□ 1.04
CHMP7-204ENST00000519414 CNPP09543 421 aaKnown RBP21.52■■□□□ 1.04
CHMP7-204ENST00000519414 GCFC2P16383 781 aaKnown RBP21.52■■□□□ 1.04
CHMP7-204ENST00000519414 CLCN5P51795 746 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 AFF1P51825 1210 aaKnown RBP21.52■■□□□ 1.04
CHMP7-204ENST00000519414 LAMTOR4Q0VGL1 99 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 UBXN11Q5T124 520 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 CNNM3Q8NE01 707 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 TMEM143Q96AN5 459 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 UBN1Q9NPG3 1134 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 MRPL17Q9NRX2 175 aaKnown RBP21.52■■□□□ 1.04
CHMP7-204ENST00000519414 WRAP73Q9P2S5 460 aaPredicted RBP21.52■■□□□ 1.04
CHMP7-204ENST00000519414 KCNJ14Q9UNX9 436 aa21.52■■□□□ 1.04
CHMP7-204ENST00000519414 NRP1O14786 923 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 ASAP2O43150 1006 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 GAS2O43903 313 aaKnown RBP21.51■■□□□ 1.03
CHMP7-204ENST00000519414 NCLP19338 710 aaKnown RBP21.51■■□□□ 1.03
CHMP7-204ENST00000519414 STK3Q13188 491 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 C15orf39Q6ZRI6 1047 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 OTUD6AQ7L8S5 288 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 NEK8Q86SG6 692 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 C4orf19Q8IY42 314 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 FEZF2Q8TBJ5 459 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 TCP11Q8WWU5 503 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 LARP6Q9BRS8 491 aaKnown RBP21.51■■□□□ 1.03
CHMP7-204ENST00000519414 PHF20Q9BVI0 1012 aa21.51■■□□□ 1.03
CHMP7-204ENST00000519414 ZFHX2Q9C0A1 2572 aaPredicted RBP21.5■■□□□ 1.03
CHMP7-204ENST00000519414 TBX3O15119 743 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 POMCP01189 267 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 SOD2P04179 222 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 YWHABP31946 246 aaKnown RBP21.5■■□□□ 1.03
CHMP7-204ENST00000519414 NBL1P41271 181 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 TDGQ13569 410 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 PCBP1Q15365 356 aaKnown RBP eCLIP21.5■■□□□ 1.03
CHMP7-204ENST00000519414 EPHA7Q15375 998 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 RNF149Q8NC42 400 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 NAP1L4Q99733 375 aaKnown RBP21.5■■□□□ 1.03
CHMP7-204ENST00000519414 LXNQ9BS40 222 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 SSX2IPQ9Y2D8 614 aa21.5■■□□□ 1.03
CHMP7-204ENST00000519414 USP34Q70CQ2 3546 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 CCNT1O60563 726 aaKnown RBP21.49■■□□□ 1.03
CHMP7-204ENST00000519414 CDKL5O76039 1030 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 URODP06132 367 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 EMC2Q15006 297 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 FERMT3Q86UX7 667 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 SMG8Q8ND04 991 aaKnown RBP21.49■■□□□ 1.03
CHMP7-204ENST00000519414 CMASQ8NFW8 434 aaPredicted RBP21.49■■□□□ 1.03
CHMP7-204ENST00000519414 HAS1Q92839 578 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 SNX27Q96L92 541 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 TBC1D32Q96NH3 1257 aa21.49■■□□□ 1.03
CHMP7-204ENST00000519414 MARCH6O60337 910 aa21.48■■□□□ 1.03
CHMP7-204ENST00000519414 ERLIN2O94905 339 aa21.48■■□□□ 1.03
CHMP7-204ENST00000519414 ITGA4P13612 1032 aa21.48■■□□□ 1.03
CHMP7-204ENST00000519414 XBP1P17861 261 aa21.48■■□□□ 1.03
CHMP7-204ENST00000519414 COLGALT2Q8IYK4 626 aa21.48■■□□□ 1.03
CHMP7-204ENST00000519414 RPS6KC1Q96S38 1066 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms