RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 COL4A3BPQ9Y5P4 624 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 SQORQ9Y6N5 450 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 COL4A6Q14031 1691 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 MYO7AQ13402 2215 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 SMTNL1A8MU46 457 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 ENPP3O14638 875 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 GAS2O43903 313 aaKnown RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 DGAT1O75907 488 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 GJB5O95377 273 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 SRGAP2CP0DJJ0 459 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 DARSP14868 501 aaKnown RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 EIF4BP23588 611 aaKnown RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 STAT6P42226 847 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 LAMTOR4Q0VGL1 99 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 MORC3Q14149 939 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 PADI6Q6TGC4 694 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 KCNK18Q7Z418 384 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 RTN4RL1Q86UN2 441 aaPredicted RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 ZNF410Q86VK4 478 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 PHOSPHO2Q8TCD6 241 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 ASAP3Q8TDY4 903 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 TCP11Q8WWU5 503 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 LARP4BQ92615 738 aaKnown RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 ADAM2Q99965 735 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 POLR3FQ9H1D9 316 aaPredicted RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 BHMT2Q9H2M3 363 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 SEMA6BQ9H3T3 888 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 ZNF576Q9H609 170 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 SLC28A3Q9HAS3 691 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 GRPEL1Q9HAV7 217 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 POLD4Q9HCU8 107 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 GPRC5CQ9NQ84 441 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 MTMR10Q9NXD2 777 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 ATG2AQ2TAZ0 1938 aa8.38□□□□□ -1.07
SDCBP-206ENST00000519115 PRRC2BQ5JSZ5 2229 aaKnown RBP8.38□□□□□ -1.07
SDCBP-206ENST00000519115 A0A087X0B3 334 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 DENND3A2RUS2 1198 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 E9PMD0 336 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GPR182O15218 404 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-206ENST00000519115 KIF20AO95235 890 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 ABCD1P33897 745 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 ZNF165P49910 485 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GATMP50440 423 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GRB10Q13322 594 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 CAPSQ13938 189 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 SPECC1Q5M775 1068 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 ODR4Q5SWX8 454 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 FAM102BQ5T8I3 360 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 CATSPER4Q7RTX7 472 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GAS2L3Q86XJ1 694 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 EXOC8Q8IYI6 725 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 SYT2Q8N9I0 419 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-206ENST00000519115 RNF149Q8NC42 400 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 MCPH1Q8NEM0 835 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 RAD54LQ92698 747 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GUCD1Q96NT3 240 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 YME1L1Q96TA2 773 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 FTHL17Q9BXU8 183 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 GCOM2Q9BZD3 368 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-206ENST00000519115 TRIM9Q9C026 710 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 PRDM12Q9H4Q4 367 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 MINDY3Q9H8M7 445 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 IFT122Q9HBG6 1241 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 MTUS1Q9ULD2 1270 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 TRIP11Q15643 1979 aa8.37□□□□□ -1.07
SDCBP-206ENST00000519115 TMEM265A0A087WTH1 108 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 FRMD3A2A2Y4 597 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 LRRIQ4A6NIV6 560 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 EYA4O95677 639 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 RPN1P04843 607 aaKnown RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 SSBP05455 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 CHRM1P11229 460 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 PLCG1P19174 1290 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 SFPQP23246 707 aaKnown RBP eCLIP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 GLRA2P23416 452 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 ARL2P36404 184 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 PHKA2P46019 1235 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 TPM4P67936 248 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 HTRA4P83105 476 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 CDC42EP1Q00587 391 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 TAP1Q03518 808 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 RAD51AP2Q09MP3 1159 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 DHX8Q14562 1220 aaKnown RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 DSC3Q14574 896 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 MXD4Q14582 209 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 KARSQ15046 597 aaKnown RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 PAN2Q504Q3 1202 aaKnown RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 ZNF658Q5TYW1 1059 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-206ENST00000519115 ZNF710Q8N1W2 664 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 PDILTQ8N807 584 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 RNF169Q8NCN4 708 aa8.36□□□□□ -1.07
SDCBP-206ENST00000519115 RASSF8Q8NHQ8 419 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms