RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TCF7L1Q9HCS4 588 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 SCOCQ9UIL1 159 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA9Q9Y5G4 932 aaKnown RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA8Q9Y5G5 932 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA7Q9Y5G6 932 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA6Q9Y5G7 932 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA3Q9Y5H0 932 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA2Q9Y5H1 932 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 RBM8AQ9Y5S9 174 aaKnown RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 DUSP10Q9Y6W6 482 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 FOXD2O60548 495 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-207ENST00000518569 PHF2O75151 1096 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 PLATP00750 562 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 VSIG10L2P0DP72 767 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 CNR2P34972 360 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 WASP42768 502 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 RECQLP46063 649 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-207ENST00000518569 ADAM8P78325 824 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 MCL1Q07820 350 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 MALLQ13021 153 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 TCIRG1Q13488 830 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 MUM1L1Q5H9M0 696 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 EFCAB2Q5VUJ9 269 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 GLB1L3Q8NCI6 653 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-207ENST00000518569 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS13B-207ENST00000518569 SNX33Q8WV41 574 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 NEIL1Q96FI4 390 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-207ENST00000518569 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 NELFAQ9H3P2 528 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 GREM2Q9H772 168 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 RTEL1Q9NZ71 1219 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 ZBTB21Q9ULJ3 1066 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 ADAMTS20P59510 1910 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 RPTORQ8N122 1335 aa4.93□□□□□ -1.62
VPS13B-207ENST00000518569 MATN2O00339 956 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 SLC26A4O43511 780 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 XPOTO43592 962 aaKnown RBP4.92□□□□□ -1.62
VPS13B-207ENST00000518569 TMEM127O75204 238 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 ALDH1A2O94788 518 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 SNUPNO95149 360 aaKnown RBP4.92□□□□□ -1.62
VPS13B-207ENST00000518569 OSMP13725 252 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 CTSSP25774 331 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 BPIFB4P59827 614 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 ATP2C1P98194 919 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-207ENST00000518569 TBC1D10BQ4KMP7 808 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-207ENST00000518569 UBXN11Q5T124 520 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 ZDHHC14Q8IZN3 488 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 GPR156Q8NFN8 814 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 TEKT5Q96M29 485 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 LMF1Q96S06 567 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 RBM12Q9NTZ6 932 aaKnown RBP4.92□□□□□ -1.62
VPS13B-207ENST00000518569 OAZ3Q9UMX2 235 aa4.92□□□□□ -1.62
VPS13B-207ENST00000518569 NRP1O14786 923 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 NDUFS2O75306 463 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 TOX4O94842 621 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 HMGB1P09429 215 aaKnown RBP4.91□□□□□ -1.62
VPS13B-207ENST00000518569 HSP90B1P14625 803 aaKnown RBP4.91□□□□□ -1.62
VPS13B-207ENST00000518569 VCAM1P19320 739 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 CR2P20023 1033 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 MCAMP43121 646 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 ADKP55263 362 aaKnown RBP4.91□□□□□ -1.62
VPS13B-207ENST00000518569 ODF1Q14990 250 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 ACAP2Q15057 778 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 UBE3CQ15386 1083 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 ERICH6BQ5W0A0 696 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 CPA6Q8N4T0 437 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 OR14K1Q8NGZ2 314 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 HOOK2Q96ED9 719 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 ADI1Q9BV57 179 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 MEGF9Q9H1U4 602 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 AASDHPPTQ9NRN7 309 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 PPP4R1LQ9P1A2 415 aa4.91□□□□□ -1.62
VPS13B-207ENST00000518569 THRAP3Q9Y2W1 955 aaKnown RBP4.91□□□□□ -1.62
VPS13B-207ENST00000518569 NPEPPSL1A6NEC2 478 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 PRICKLE3O43900 615 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 ABLIM3O94929 683 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 GASTP01350 101 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 C5AR1P21730 350 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 RPS19P39019 145 aaKnown RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 SLC16A1P53985 500 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 CCT2P78371 535 aaKnown RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 PPP3CAQ08209 521 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 MGAT2Q10469 447 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 DUSP8Q13202 625 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 PIN1Q13526 163 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 KRT40Q6A162 431 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 ABHD15Q6UXT9 468 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 ADGRE4PQ86SQ3 457 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 CMTR2Q8IYT2 770 aaKnown RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 CMTM4Q8IZR5 234 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 SHCBP1Q8NEM2 672 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 RIN2Q8WYP3 895 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 SLC2A13Q96QE2 648 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 GPHA2Q96T91 129 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 NUP88Q99567 741 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-207ENST00000518569 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 ADAM7Q9H2U9 754 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 ING3Q9NXR8 418 aa4.9□□□□□ -1.63
VPS13B-207ENST00000518569 SAP30BPQ9UHR5 308 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms