RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 CNOT8Q9UFF9 292 aaKnown RBP8.88□□□□□ -0.99
GATB-212ENST00000515564 SNX9Q9Y5X1 595 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 H3BRJ5 948 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 SERPINB6P35237 376 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 PLTPP55058 493 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 VCPP55072 806 aaKnown RBP8.88□□□□□ -0.99
GATB-212ENST00000515564 KCNA1Q09470 495 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 KIF19Q2TAC6 998 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 FAM102AQ5T9C2 384 aaPredicted RBP8.88□□□□□ -0.99
GATB-212ENST00000515564 CYP4A22Q5TCH4 519 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 IL31Q6EBC2 164 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 ADCK2Q7Z695 626 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 GBP7Q8N8V2 638 aaPredicted RBP8.88□□□□□ -0.99
GATB-212ENST00000515564 OPTNQ96CV9 577 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 NDST4Q9H3R1 872 aa8.88□□□□□ -0.99
GATB-212ENST00000515564 RRN3P2A6NIE6 340 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 HMGB1P1B2RPK0 211 aaPredicted RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 POLRMTO00411 1230 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 PDGFRBP09619 1106 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 RAG1P15918 1043 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 EIF4A3P38919 411 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 ITPK1Q13572 414 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 LAMC2Q13753 1193 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 EPHA7Q15375 998 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 MEI1Q5TIA1 1274 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 LMBRD2Q68DH5 695 aaPredicted RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.87□□□□□ -0.99
GATB-212ENST00000515564 SCFD2Q8WU76 684 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 VCPKMTQ9H867 229 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 PRG3Q9Y2Y8 225 aaPredicted RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 ENC1O14682 589 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 ANP32DO95626 131 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 NDUFB10O96000 172 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 HSPA8P11142 646 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 FOXO4P98177 505 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 PRKCQQ04759 706 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 WASHC5Q12768 1159 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 ANKS3Q6ZW76 656 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TRIM42Q8IWZ5 723 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 NEDD1Q8NHV4 660 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 WDR48Q8TAF3 677 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 NSUN4Q96CB9 384 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 RSRC1Q96IZ7 334 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 C11orf70Q9BRQ4 267 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TSSK1BQ9BXA7 367 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TRIM54Q9BYV2 358 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 IGFLR1Q9H665 355 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 ERAP1Q9NZ08 941 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 A6NNZ2 444 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 PQBP1O60828 265 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 PLS3P13797 630 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 AP3M2P53677 418 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 ARHGEF7Q14155 803 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TUBB8Q3ZCM7 444 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 XKR3Q5GH77 459 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 PCSK9Q8NBP7 692 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 NR2E3Q9Y5X4 410 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 ALKQ9UM73 1620 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TDP2O95551 362 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 NR3C2P08235 984 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 RWDD2BP57060 319 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 PRAMEP78395 509 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 RBBP7Q16576 425 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 CEP55Q53EZ4 464 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 PYROXD1Q8WU10 500 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 SCG3Q8WXD2 468 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 TRIM45Q9H8W5 580 aaPredicted RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 NHEJ1Q9H9Q4 299 aaPredicted RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 ERCC6L2Q5T890 1561 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TECPR2O15040 1411 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 HNRNPCL2B2RXH8 293 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 HNRNPCL1O60812 293 aaKnown RBP8.87□□□□□ -0.99
GATB-212ENST00000515564 USP11P51784 963 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 IL9RQ01113 521 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 OCRLQ01968 901 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 C12orf60Q5U649 245 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 UBE2Q2Q8WVN8 375 aa8.87□□□□□ -0.99
GATB-212ENST00000515564 MGEA5O60502 916 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 NPTXRO95502 500 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 CD4P01730 458 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 AKT1P31749 480 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 RBP5P82980 135 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 CCDC15Q0P6D6 951 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 TFDP2Q14188 446 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 TMEM132BQ14DG7 1078 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 TBK1Q9UHD2 729 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 TULP4Q9NRJ4 1543 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 KNOP1Q1ED39 458 aaKnown RBP8.86□□□□□ -0.99
GATB-212ENST00000515564 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 RNF10Q8N5U6 811 aaKnown RBP8.86□□□□□ -0.99
GATB-212ENST00000515564 LINC00301Q8NCQ3 95 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 MIPOL1Q8TD10 442 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 ATG4CQ96DT6 458 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 CENPKQ9BS16 269 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 MID2Q9UJV3 735 aa8.86□□□□□ -0.99
GATB-212ENST00000515564 SYNGAP1Q96PV0 1343 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms