RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-229	ENST00000513756	OSBPL6	Q9BZF3	934 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	PLEKHA4	Q9H4M7	779 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	ZSCAN32	Q9NX65	697 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	ZDHHC7	Q9NXF8	308 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	USP18	Q9UMW8	372 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	SMG5	Q9UPR3	1016 aa	Known RBP	13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	NUMBL	Q9Y6R0	609 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	MAP1B	P46821	2468 aa	Known RBP	13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	CHD8	Q9HCK8	2581 aa		13.59	□□□□□ -0.23
PTPN20-229	ENST00000513756	MIA3	Q5JRA6	1907 aa		13.58	□□□□□ -0.23
PTPN20-229	ENST00000513756	DCDC2B	A2VCK2	349 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	TEX28	O15482	410 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	TBC1D4	O60343	1298 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	RFPL2	O75678	378 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	PAPLN	O95428	1278 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	PRKCE	Q02156	737 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	PRKCQ	Q04759	706 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	DIEXF	Q68CQ4	756 aa	Known RBP	13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	TYW1B	Q6NUM6	668 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	ZNF410	Q86VK4	478 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	NT5C3A	Q9H0P0	336 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	EPC1	Q9H2F5	836 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	RBM28	Q9NW13	759 aa	Known RBP	13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	BARHL2	Q9NY43	387 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	DOCK8	Q8NF50	2099 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756	CNTNAP2	Q9UHC6	1331 aa		13.58	□□□□□ -0.24
PTPN20-229	ENST00000513756		A0A087WZ62	844 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	MEIS3P2	A8K0S8	358 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	NRP1	O14786	923 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	GAS2	O43903	313 aa	Known RBP	13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	LRRN2	O75325	713 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	DDHD2	O94830	711 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	GLUD2	P49448	558 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	SNW1	Q13573	536 aa	Known RBP	13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	UBXN2B	Q14CS0	331 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	MLF2	Q15773	248 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	CATSPER4	Q7RTX7	472 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	MICU3	Q86XE3	530 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	RAB11FIP4	Q86YS3	637 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	ZBTB44	Q8NCP5	570 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	MAP4K1	Q92918	833 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	ZNF707	Q96C28	371 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	PRKD2	Q9BZL6	878 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	RSAD1	Q9HA92	442 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	RXFP1	Q9HBX9	757 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	DISC1	Q9NRI5	854 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	GMEB2	Q9UKD1	530 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	PCDHB2	Q9Y5E7	798 aa		13.57	□□□□□ -0.24
PTPN20-229	ENST00000513756	FAM170B	A6NMN3	283 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	NCAM2	O15394	837 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	ZNF862	O60290	1169 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	B4GALT3	O60512	393 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	CHML	P26374	656 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	GPC5	P78333	572 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	PFKP	Q01813	784 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	SLC44A4	Q53GD3	710 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	JAKMIP3	Q5VZ66	844 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	AGMO	Q6ZNB7	445 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	MTSS1L	Q765P7	747 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	DDX23	Q9BUQ8	820 aa	Known RBP	13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	UBN1	Q9NPG3	1134 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	RAB23	Q9ULC3	237 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	RBM8A	Q9Y5S9	174 aa	Known RBP	13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756		V9GY48	417 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	CNTNAP5	Q8WYK1	1306 aa		13.56	□□□□□ -0.24
PTPN20-229	ENST00000513756	LILRB5	O75023	590 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	NR1I2	O75469	434 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	SPATA31D3	P0C874	917 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	MYB	P10242	640 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	FSHR	P23945	695 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	SFN	P31947	248 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	DSG1	Q02413	1049 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	TARBP2	Q15633	366 aa	Known RBP	13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	PRR16	Q569H4	304 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	ZBTB41	Q5SVQ8	909 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	SPATA31D4	Q6ZUB0	917 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	TAS1R1	Q7RTX1	841 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	MRPL10	Q7Z7H8	261 aa	Known RBP	13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	SGMS1	Q86VZ5	419 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	PALB2	Q86YC2	1186 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	RHPN2	Q8IUC4	686 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	CRYGN	Q8WXF5	182 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	NELL2	Q99435	816 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	USP24	Q9UPU5	2620 aa		13.55	□□□□□ -0.24
PTPN20-229	ENST00000513756	WDR81	Q562E7	1941 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	SGSM2	O43147	1006 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	TGM5	O43548	720 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	POMC	P01189	267 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	OR1G1	P47890	313 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	JAK3	P52333	1124 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	CREM	Q03060	361 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	DRP2	Q13474	957 aa		13.54	□□□□□ -0.24
PTPN20-229	ENST00000513756	MTERF2	Q49AM1	385 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms