RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	RNF149	Q8NC42	400 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	EDA	Q92838	391 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	LPP	Q93052	612 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	CCDC51	Q96ER9	411 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TMEM169	Q96HH4	297 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	MTR	Q99707	1265 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	UBN1	Q9NPG3	1134 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TECTA	O75443	2155 aa		13.99	□□□□□ -0.17
UBE2D3-231	ENST00000513098	WNT7A	O00755	349 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	CLASP2	O75122	1294 aa	Known RBP	13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	CXCL14	O95715	111 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	CTSA	P10619	480 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TEC	P42680	631 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TXK	P42681	527 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	RARRES1	P49788	294 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	VPS52	Q8N1B4	723 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	CASP10	Q92851	521 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	FAM122A	Q96E09	287 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TMEM175	Q9BSA9	504 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ZBP1	Q9H171	429 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	KCNH6	Q9H252	994 aa		13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	FOXP1	Q9H334	677 aa	Predicted RBP	13.98	□□□□□ -0.17
UBE2D3-231	ENST00000513098	NT5C1B-RDH14	C9J2C7	533 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ALDH2	P05091	517 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	SPATA31C1	P0DKV0	1188 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ITIH3	Q06033	890 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	NCBP1	Q09161	790 aa	Known RBP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TFDP1	Q14186	410 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	SAFB	Q15424	915 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TPRN	Q4KMQ1	711 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	BMP8A	Q7Z5Y6	402 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TMEM173	Q86WV6	379 aa	Predicted RBP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ZNF280B	Q86YH2	543 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	SMG8	Q8ND04	991 aa	Known RBP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	FBXO18	Q8NFZ0	1043 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	URGCP	Q8TCY9	931 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TMEM60	Q9H2L4	133 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ADAM7	Q9H2U9	754 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	RSAD1	Q9HA92	442 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TUFT1	Q9NNX1	390 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	DAXX	Q9UER7	740 aa	Predicted RBP	13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	MUTYH	Q9UIF7	546 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	HCFC2	Q9Y5Z7	792 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ZNF318	Q5VUA4	2279 aa		13.97	□□□□□ -0.17
UBE2D3-231	ENST00000513098	TSPAN1	O60635	241 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	LILRB3	O75022	631 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	DDHD2	O94830	711 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	EFEMP2	O95967	443 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	SLC11A1	P49279	550 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	RNASEL	Q05823	741 aa	Known RBP	13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	AMHR2	Q16671	573 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	NOTUM	Q6P988	496 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	CATSPER3	Q86XQ3	398 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	NECTIN4	Q96NY8	510 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	KIF2C	Q99661	725 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	DNAJB4	Q9UDY4	337 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	DBR1	Q9UK59	544 aa	Known RBP	13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098	ARID2	Q68CP9	1835 aa		13.96	□□□□□ -0.17
UBE2D3-231	ENST00000513098		A0A1B0GUA9	196 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ERLIN2	O94905	339 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MUT	P22033	750 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GLRA2	P23416	452 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	TRAPPC10	P48553	1259 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	AFF1	P51825	1210 aa	Known RBP	13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	HMGN5	P82970	282 aa	Known RBP	13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MBTD1	Q05BQ5	628 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CAPS	Q13938	189 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	LONRF3	Q496Y0	759 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PPFIBP1	Q86W92	1011 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ASAP3	Q8TDY4	903 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PIGO	Q8TEQ8	1089 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	SLC22A17	Q8WUG5	538 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	C8orf76	Q96K31	380 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MFSD14A	Q96MC6	490 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	NACC1	Q96RE7	527 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	VN1R3	Q9BXE9	311 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CSRNP2	Q9H175	543 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	DZANK1	Q9NVP4	752 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	INPP5F	Q9Y2H2	1132 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	FAN1	Q9Y2M0	1017 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	IPP	Q9Y573	584 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZMYM2	Q9UBW7	1377 aa		13.95	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ARL5C	A6NH57	179 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	POTEM	A6NI47	508 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	B4GALT3	O60512	393 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ITGA4	P13612	1032 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RPA1	P27694	616 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MCM7	P33993	719 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RBM25	P49756	843 aa	Known RBP	13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZXDA	P98168	799 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	DSC1	Q08554	894 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	FAM187B	Q17R55	369 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CES5A	Q6NT32	575 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	LLGL2	Q6P1M3	1020 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	TRIM67	Q6ZTA4	783 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms