RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 ELOA2Q8IYF1 753 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 NUP85Q9BW27 656 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 THAP2Q9H0W7 228 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■■■ 68.7
PRDM16-207ENST00000512462 DESP17661 470 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 MUM1L1Q5H9M0 696 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 FAM47CQ5HY64 1035 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 NSUN6Q8TEA1 469 aaKnown RBP12.84□□□□□ -0.35
PRDM16-207ENST00000512462 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 FMO2Q99518 471 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 MAK16Q9BXY0 300 aaKnown RBP12.84□□□□□ -0.35
PRDM16-207ENST00000512462 ZWILCHQ9H900 591 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 LRRD1A4D1F6 860 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 SLITRK3O94933 977 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 MYBL2P10244 700 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 SREBF1P36956 1147 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 RUFY4Q6ZNE9 571 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 CTAGE3PQ8IX95 158 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
PRDM16-207ENST00000512462 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 CAPN7Q9Y6W3 813 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-207ENST00000512462 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 PSAPP07602 524 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 ITGA4P13612 1032 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 CCNI2Q6ZMN8 369 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-207ENST00000512462 FRMD5Q7Z6J6 570 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 GDAP1Q8TB36 358 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 RNPC3Q96LT9 517 aaKnown RBP12.84□□□□□ -0.35
PRDM16-207ENST00000512462 CCDC77Q9BR77 488 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 EHD4Q9H223 541 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 RNF19AQ9NV58 838 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 PCSK1NQ9UHG2 260 aa12.84□□□□□ -0.35
PRDM16-207ENST00000512462 GAS8O95995 478 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 NR1D1P20393 614 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 PSMC5P62195 406 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 SNRNP35Q16560 246 aaKnown RBP12.83□□□□□ -0.36
PRDM16-207ENST00000512462 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
PRDM16-207ENST00000512462 GGT7Q9UJ14 662 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 FBXL5Q9UKA1 691 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 LAMB2P55268 1798 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 PGK2P07205 417 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 JAG1P78504 1218 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 LRRC14Q15048 493 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-207ENST00000512462 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 TRIM59Q8IWR1 403 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF564Q8TBZ8 553 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 APEX2Q9UBZ4 518 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-207ENST00000512462 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 CLDN3O15551 220 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 FGFR4P22455 802 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 KCNMA1Q12791 1236 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 EXOC4Q96A65 974 aa12.83□□□□□ -0.36
PRDM16-207ENST00000512462 IQCGQ9H095 443 aaKnown RBP12.83□□□□□ -0.36
PRDM16-207ENST00000512462 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF263O14978 683 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 FANCGO15287 622 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 CTNND1O60716 968 aaKnown RBP12.82□□□□□ -0.36
PRDM16-207ENST00000512462 GLI1P08151 1106 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 DLG4P78352 724 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 TRADDQ15628 312 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 AADACL2Q6P093 401 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 LRRC55Q6ZSA7 311 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 ADAM22Q9P0K1 906 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 SAMD15Q9P1V8 674 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 TMX2Q9Y320 296 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.82□□□□□ -0.36
PRDM16-207ENST00000512462 WDR91A4D1P6 747 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 CNGA1P29973 690 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 SEC24CP53992 1094 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 CBWD6Q4V339 395 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 CBWD3Q5JTY5 395 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 CBWD5Q5RIA9 395 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 RSRC2Q7L4I2 434 aaKnown RBP12.82□□□□□ -0.36
PRDM16-207ENST00000512462 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 PPP1R14CQ8TAE6 165 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 JPH1Q9HDC5 661 aaPredicted RBP12.82□□□□□ -0.36
PRDM16-207ENST00000512462 TBC1D22BQ9NU19 505 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms