RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ITGA1P56199 1179 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 SLC39A6Q13433 755 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 CRY2Q49AN0 593 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 YOD1Q5VVQ6 348 aaPredicted RBP7.27□□□□□ -1.25
GYPB-212ENST00000511198 STK32CQ86UX6 486 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 ZC3H18Q86VM9 953 aaKnown RBP7.27□□□□□ -1.25
GYPB-212ENST00000511198 CKAP2LQ8IYA6 745 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 KYQ8NBH2 561 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 ATXN2LQ8WWM7 1075 aaKnown RBP7.27□□□□□ -1.25
GYPB-212ENST00000511198 ZNF669Q96BR6 464 aaPredicted RBP7.27□□□□□ -1.25
GYPB-212ENST00000511198 FLT4P35916 1363 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 C5orf42Q9H799 3197 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 SETXQ7Z333 2677 aaKnown RBP7.26□□□□□ -1.25
GYPB-212ENST00000511198 PSMD14O00487 310 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 PRICKLE3O43900 615 aaPredicted RBP7.26□□□□□ -1.25
GYPB-212ENST00000511198 DGKIO75912 1065 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 SGPL1O95470 568 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 PRR31Q5SQ13 230 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 ZFYVE27Q5T4F4 411 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 KCNT2Q6UVM3 1135 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 NSMFQ6X4W1 530 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 TTLL7Q6ZT98 887 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 SPATC1Q76KD6 591 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 ZNF761Q86XN6 746 aaPredicted RBP7.26□□□□□ -1.25
GYPB-212ENST00000511198 LRRC47Q8N1G4 583 aaKnown RBP7.26□□□□□ -1.25
GYPB-212ENST00000511198 DCAF4Q8WV16 495 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 PAWRQ96IZ0 340 aaKnown RBP7.26□□□□□ -1.25
GYPB-212ENST00000511198 JAM3Q9BX67 310 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 RTFDC1Q9BY42 306 aaPredicted RBP7.26□□□□□ -1.25
GYPB-212ENST00000511198 PCDHB4Q9Y5E5 795 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 CHD6Q8TD26 2715 aa7.26□□□□□ -1.25
GYPB-212ENST00000511198 TRAV20A0A0B4J274 112 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 BLACEA4D250 179 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 PDPK1O15530 556 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 SMARCA5O60264 1052 aaPredicted RBP7.25□□□□□ -1.25
GYPB-212ENST00000511198 RPL13P26373 211 aaKnown RBP7.25□□□□□ -1.25
GYPB-212ENST00000511198 KIAA2012Q0VF49 1180 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 TCIRG1Q13488 830 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 ARHGEF6Q15052 776 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 SPATA9Q9BWV2 254 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 TANGO6Q9C0B7 1094 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 NGRNQ9NPE2 291 aaKnown RBP7.25□□□□□ -1.25
GYPB-212ENST00000511198 TERF2IPQ9NYB0 399 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 DTLQ9NZJ0 730 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 TAF1P21675 1872 aa7.25□□□□□ -1.25
GYPB-212ENST00000511198 ATRXP46100 2492 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 KIF24Q5T7B8 1368 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 FYB1O15117 783 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 ADCY3O60266 1144 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 NKX3-2P78367 333 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 ADAM9Q13443 819 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 PRKG1Q13976 671 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 RTP5Q14D33 572 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 SKOR2Q2VWA4 1001 aaPredicted RBP7.24□□□□□ -1.25
GYPB-212ENST00000511198 LBX2Q6XYB7 198 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 ADAMTS17Q8TE56 1095 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 DIS3LQ8TF46 1054 aaKnown RBP7.24□□□□□ -1.25
GYPB-212ENST00000511198 TOE1Q96GM8 510 aaKnown RBP7.24□□□□□ -1.25
GYPB-212ENST00000511198 CCDC113Q9H0I3 377 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 SMOC1Q9H4F8 434 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 SLC6A20Q9NP91 592 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 MYOTQ9UBF9 498 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 WASF3Q9UPY6 502 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 DUSP10Q9Y6W6 482 aa7.24□□□□□ -1.25
GYPB-212ENST00000511198 TCF20Q9UGU0 1960 aaKnown RBP7.24□□□□□ -1.25
GYPB-212ENST00000511198 REV3LO60673 3130 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 LAMB1P07942 1786 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 LRG1P02750 347 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 ATP2B1P20020 1258 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 MRPS5P82675 430 aaKnown RBP7.23□□□□□ -1.25
GYPB-212ENST00000511198 IFRD2Q12894 506 aaPredicted RBP7.23□□□□□ -1.25
GYPB-212ENST00000511198 RASGRF1Q13972 1273 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 ZNF530Q6P9A1 599 aaPredicted RBP7.23□□□□□ -1.25
GYPB-212ENST00000511198 TEPPQ6URK8 271 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 PIP4K2CQ8TBX8 421 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 PHOSPHO1Q8TCT1 267 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 ZFYVE21Q9BQ24 234 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 YIPF4Q9BSR8 244 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 LNPKQ9C0E8 428 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 USP40Q9NVE5 1235 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 ASH2LQ9UBL3 628 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 FZD1Q9UP38 647 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 DCHS1Q96JQ0 3298 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 WASHC2AQ641Q2 1341 aa7.23□□□□□ -1.25
GYPB-212ENST00000511198 RIC1Q4ADV7 1423 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 SMIM22K7EJ46 135 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 TFRCP02786 760 aaKnown RBP7.22□□□□□ -1.25
GYPB-212ENST00000511198 A1BGP04217 495 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 CTGFP29279 349 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 IL6STP40189 918 aaPredicted RBP7.22□□□□□ -1.25
GYPB-212ENST00000511198 GPR85P60893 370 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 OTOP3Q7RTS5 596 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 WNK4Q96J92 1243 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 CRAMP1Q96RY5 1269 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 HSPBP1Q9NZL4 362 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 ATP6V0A2Q9Y487 856 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 KIF7Q2M1P5 1343 aa7.22□□□□□ -1.25
GYPB-212ENST00000511198 CFAP47Q6ZTR5 3102 aa7.21□□□□□ -1.25
GYPB-212ENST00000511198 KRIT1O00522 736 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms