RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SLC37A4O43826 429 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 CCNT1O60563 726 aaKnown RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 CDKL5O76039 1030 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 DDHD2O94830 711 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 GCFC2P16383 781 aaKnown RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 EPCAMP16422 314 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 SLC11A1P49279 550 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 LAMTOR4Q0VGL1 99 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 NPY5RQ15761 445 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 KIAA1841Q6NSI8 718 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 TMC5Q6UXY8 1006 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 AGMOQ6ZNB7 445 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 NEK8Q86SG6 692 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 C4orf19Q8IY42 314 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 ZNF579Q8NAF0 562 aaKnown RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 CNNM3Q8NE01 707 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 TMEM143Q96AN5 459 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 ACSF2Q96CM8 615 aaPredicted RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 KLHL5Q96PQ7 755 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 TMEM175Q9BSA9 504 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 DHX33Q9H6R0 707 aaKnown RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 KCNMB3Q9NPA1 279 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 UBN1Q9NPG3 1134 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 MRPL17Q9NRX2 175 aaKnown RBP9.32□□□□□ -0.92
TRIO-217ENST00000511019 AGPAT5Q9NUQ2 364 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 USTQ9Y2C2 406 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 SSX2IPQ9Y2D8 614 aa9.32□□□□□ -0.92
TRIO-217ENST00000511019 H0Y858 1186 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 NRP1O14786 923 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 GAS2O43903 313 aaKnown RBP9.31□□□□□ -0.92
TRIO-217ENST00000511019 ST18O60284 1047 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 BRD1O95696 1058 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 PDGFBP01127 241 aaPredicted RBP9.31□□□□□ -0.92
TRIO-217ENST00000511019 POMCP01189 267 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 SSBP05455 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRIO-217ENST00000511019 ITGA4P13612 1032 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 HOXA11P31270 313 aaPredicted RBP9.31□□□□□ -0.92
TRIO-217ENST00000511019 YWHABP31946 246 aaKnown RBP9.31□□□□□ -0.92
TRIO-217ENST00000511019 XKR9Q5GH70 373 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 UBXN11Q5T124 520 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 PIK3AP1Q6ZUJ8 805 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 GPR149Q86SP6 731 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 FERMT3Q86UX7 667 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 TPH2Q8IWU9 490 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 RNF149Q8NC42 400 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 BCL7CQ8WUZ0 217 aaPredicted RBP9.31□□□□□ -0.92
TRIO-217ENST00000511019 MFSD1Q9H3U5 465 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 ZSWIM4Q9H7M6 989 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 SFXN1Q9H9B4 322 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 RSAD1Q9HA92 442 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 FAM86C1Q9NVL1 165 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 RGL1Q9NZL6 768 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 VAV3Q9UKW4 847 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
TRIO-217ENST00000511019 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 GFRA3O60609 400 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 LILRB3O75022 631 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 NR1I2O75469 434 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 ERLIN2O94905 339 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 SLITRK3O94933 977 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 ASGR2P07307 311 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 CNPP09543 421 aaKnown RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 NCLP19338 710 aaKnown RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 AXLP30530 894 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 OR1G1P47890 313 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 VASPP50552 380 aaPredicted RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 CLCN4P51793 760 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 AFF1P51825 1210 aaKnown RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 SCRN1Q12765 414 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 TFDP1Q14186 410 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 CTTNQ14247 550 aaKnown RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 MXD4Q14582 209 aaPredicted RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 PCBP1Q15365 356 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIO-217ENST00000511019 PTPN14Q15678 1187 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 NCAPH2Q6IBW4 605 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 ELMSAN1Q6PJG2 1045 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 OTOP3Q7RTS5 596 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 SLFN12Q8IYM2 578 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 WASF1Q92558 559 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 HAS1Q92839 578 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 MTRQ99707 1265 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 COLEC11Q9BWP8 271 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 MINDY3Q9H8M7 445 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 WRAP73Q9P2S5 460 aaPredicted RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 DPP7Q9UHL4 492 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 PCDHA12Q9UN75 941 aa9.3□□□□□ -0.92
TRIO-217ENST00000511019 MYH9P35579 1960 aaKnown RBP9.3□□□□□ -0.92
TRIO-217ENST00000511019 C2CD2LO14523 706 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 ZBTB39O15060 712 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 PFKFB2O60825 505 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 SOD2P04179 222 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 CLCN5P51795 746 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 AK2P54819 239 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 CYP4A11Q02928 519 aa9.29□□□□□ -0.92
TRIO-217ENST00000511019 POU5F1BQ06416 359 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms