RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 RFC5P40937 340 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 SLC11A1P49279 550 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 NUBP1P53384 320 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 LAMTOR4Q0VGL1 99 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 AGMOQ6ZNB7 445 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
SMAD5-206ENST00000509962 ZDHHC14Q8IZN3 488 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
SMAD5-206ENST00000509962 TDRD5Q8NAT2 981 aaKnown RBP16.59■□□□□ 0.25
SMAD5-206ENST00000509962 TCP11Q8WWU5 503 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 TMEM143Q96AN5 459 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 RSAD1Q9HA92 442 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 KCNMB3Q9NPA1 279 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
SMAD5-206ENST00000509962 TBX3O15119 743 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 DDHD2O94830 711 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMAD5-206ENST00000509962 YWHABP31946 246 aaKnown RBP16.58■□□□□ 0.24
SMAD5-206ENST00000509962 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.24
SMAD5-206ENST00000509962 EPHA7Q15375 998 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 TMC5Q6UXY8 1006 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 C4orf19Q8IY42 314 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 CNNM3Q8NE01 707 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 BCL7CQ8WUZ0 217 aaPredicted RBP16.58■□□□□ 0.24
SMAD5-206ENST00000509962 DHX33Q9H6R0 707 aaKnown RBP16.58■□□□□ 0.24
SMAD5-206ENST00000509962 UBN1Q9NPG3 1134 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 USTQ9Y2C2 406 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 KMT2EQ8IZD2 1858 aa16.58■□□□□ 0.24
SMAD5-206ENST00000509962 ZDBF2Q9HCK1 2354 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 CNTNAP2Q9UHC6 1331 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 GAS2O43903 313 aaKnown RBP16.57■□□□□ 0.24
SMAD5-206ENST00000509962 ASGR2P07307 311 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 PTPN14Q15678 1187 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 NCAPH2Q6IBW4 605 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 PIK3AP1Q6ZUJ8 805 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 RNF149Q8NC42 400 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 HAS1Q92839 578 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 ACSF2Q96CM8 615 aaPredicted RBP16.57■□□□□ 0.24
SMAD5-206ENST00000509962 KLHL5Q96PQ7 755 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 TMEM175Q9BSA9 504 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 MINDY3Q9H8M7 445 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 MRPL17Q9NRX2 175 aaKnown RBP16.57■□□□□ 0.24
SMAD5-206ENST00000509962 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
SMAD5-206ENST00000509962 FAM86C1Q9NVL1 165 aa16.57■□□□□ 0.24
SMAD5-206ENST00000509962 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
SMAD5-206ENST00000509962 H0Y858 1186 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 NRP1O14786 923 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 ST18O60284 1047 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 ERLIN2O94905 339 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 POMCP01189 267 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 ITGA4P13612 1032 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 HOXA11P31270 313 aaPredicted RBP16.56■□□□□ 0.24
SMAD5-206ENST00000509962 SCRN1Q12765 414 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 OTOP3Q7RTS5 596 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 GPR149Q86SP6 731 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 FERMT3Q86UX7 667 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 SLFN12Q8IYM2 578 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 LXNQ9BS40 222 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 VN1R3Q9BXE9 311 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 MFSD1Q9H3U5 465 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 ZSWIM4Q9H7M6 989 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 SFXN1Q9H9B4 322 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 RGL1Q9NZL6 768 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 SSX2IPQ9Y2D8 614 aa16.56■□□□□ 0.24
SMAD5-206ENST00000509962 B4GALT3O60512 393 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 CNPP09543 421 aaKnown RBP16.55■□□□□ 0.24
SMAD5-206ENST00000509962 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
SMAD5-206ENST00000509962 CLCN4P51793 760 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 AFF1P51825 1210 aaKnown RBP16.55■□□□□ 0.24
SMAD5-206ENST00000509962 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
SMAD5-206ENST00000509962 MXD4Q14582 209 aaPredicted RBP16.55■□□□□ 0.24
SMAD5-206ENST00000509962 EMC2Q15006 297 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 PCBP1Q15365 356 aaKnown RBP eCLIP16.55■□□□□ 0.24
SMAD5-206ENST00000509962 UBXN11Q5T124 520 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 MTRQ99707 1265 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
SMAD5-206ENST00000509962 C2CD2LO14523 706 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 ZBTB39O15060 712 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 GALR2O43603 387 aaPredicted RBP16.54■□□□□ 0.24
SMAD5-206ENST00000509962 LILRB3O75022 631 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 NR1I2O75469 434 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 AXLP30530 894 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 OR1G1P47890 313 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 CYP4A11Q02928 519 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 TFDP1Q14186 410 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 CCDC149Q6ZUS6 474 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 SMG8Q8ND04 991 aaKnown RBP16.54■□□□□ 0.24
SMAD5-206ENST00000509962 WASF1Q92558 559 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 SMOC2Q9H3U7 446 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 DPP7Q9UHL4 492 aa16.54■□□□□ 0.24
SMAD5-206ENST00000509962 STK36Q9NRP7 1315 aa16.53■□□□□ 0.24
SMAD5-206ENST00000509962 GFRA3O60609 400 aa16.53■□□□□ 0.24
SMAD5-206ENST00000509962 PFKFB2O60825 505 aa16.53■□□□□ 0.24
SMAD5-206ENST00000509962 SLITRK3O94933 977 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms