RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 TECP42680 631 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 PHKA2P46019 1235 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 RAB27AP51159 221 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 KRT17Q04695 432 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 UBE3AQ05086 875 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
TUSC3-208ENST00000509177 KCNC3Q14003 757 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 TFDP1Q14186 410 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 DUSP6Q16828 381 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 TTC38Q5R3I4 469 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 RIF1Q5UIP0 2472 aaKnown RBP12.07□□□□□ -0.48
TUSC3-208ENST00000509177 SRGAP1Q7Z6B7 1085 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 FERMT3Q86UX7 667 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 NOSTRINQ8IVI9 506 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 RNF149Q8NC42 400 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 ERMNQ8TAM6 284 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
TUSC3-208ENST00000509177 TMEM60Q9H2L4 133 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 IFT122Q9HBG6 1241 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 ANKEF1Q9NU02 776 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 WDR87Q6ZQQ6 2873 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 FNDC1Q4ZHG4 1894 aaPredicted RBP12.06□□□□□ -0.48
TUSC3-208ENST00000509177 FSCN2O14926 492 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 DGAT1O75907 488 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 ERLIN2O94905 339 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 LYPLA2O95372 231 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 PDGFBP01127 241 aaPredicted RBP12.06□□□□□ -0.48
TUSC3-208ENST00000509177 OR52Z1P0C646 297 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 PPM1AP35813 382 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
TUSC3-208ENST00000509177 ORC2Q13416 577 aaPredicted RBP12.06□□□□□ -0.48
TUSC3-208ENST00000509177 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
TUSC3-208ENST00000509177 CLLU1OSQ5K130 101 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 KCNT2Q6UVM3 1135 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 GLB1LQ6UWU2 654 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 LPPQ93052 612 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 PGBD4Q96DM1 585 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 CDCA3Q99618 268 aaPredicted RBP12.06□□□□□ -0.48
TUSC3-208ENST00000509177 CWH43Q9H720 699 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 FAM105AQ9NUU6 356 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 RNF19AQ9NV58 838 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 SPG21Q9NZD8 308 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 INPP5FQ9Y2H2 1132 aa12.06□□□□□ -0.48
TUSC3-208ENST00000509177 WDR81Q562E7 1941 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 H0Y858 1186 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 INO80B-WBP1J3KQ70 363 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 XRCC6P12956 609 aaKnown RBP eCLIP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 CA8P35219 290 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 PBX3P40426 434 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 RNASELQ05823 741 aaKnown RBP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 BMS1Q14692 1282 aaKnown RBP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 SYCE2Q6PIF2 218 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 TMEM184AQ6ZMB5 413 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 LRRC55Q6ZSA7 311 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 MAEAQ7L5Y9 396 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 URGCPQ8TCY9 931 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 MRPS27Q92552 414 aaKnown RBP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 ATOH1Q92858 354 aaPredicted RBP12.05□□□□□ -0.48
TUSC3-208ENST00000509177 NACC1Q96RE7 527 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 APOL5Q9BWW9 433 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 GBP3Q9H0R5 595 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 TUFT1Q9NNX1 390 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 ENTPD7Q9NQZ7 604 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 AGPAT5Q9NUQ2 364 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 PCDHB2Q9Y5E7 798 aa12.05□□□□□ -0.48
TUSC3-208ENST00000509177 PLXNA3P51805 1871 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 HIDE1A8MVS5 230 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 H3BQV1 296 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 ZC3H11AO75152 810 aaKnown RBP eCLIP12.04□□□□□ -0.48
TUSC3-208ENST00000509177 SP100P23497 879 aaPredicted RBP12.04□□□□□ -0.48
TUSC3-208ENST00000509177 RARRES1P49788 294 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 PTENP60484 403 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 PLCB3Q01970 1234 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 NOMO2Q5JPE7 1267 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 PLPP4Q5VZY2 271 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
TUSC3-208ENST00000509177 ANKRD54Q6NXT1 300 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 LLGL2Q6P1M3 1020 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 TMC7Q7Z402 723 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 CATSPER3Q86XQ3 398 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 TMEM87AQ8NBN3 555 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 TMEM169Q96HH4 297 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 RIPOR3Q96MK2 946 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 FAM193BQ96PV7 902 aaPredicted RBP12.04□□□□□ -0.48
TUSC3-208ENST00000509177 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
TUSC3-208ENST00000509177 TRAIPQ9BWF2 469 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 MINDY3Q9H8M7 445 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
TUSC3-208ENST00000509177 XPNPEP1Q9NQW7 623 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 CDH22Q9UJ99 828 aa12.04□□□□□ -0.48
TUSC3-208ENST00000509177 DNAH14Q0VDD8 3507 aa12.03□□□□□ -0.48
TUSC3-208ENST00000509177 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
TUSC3-208ENST00000509177 ARHGEF35A5YM69 484 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms