RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
CCSER1-208ENST00000509109 PCDHA11Q9Y5I1 949 aa8.56□□□□□ -1.04
CCSER1-208ENST00000509109 RBM8AQ9Y5S9 174 aaKnown RBP8.56□□□□□ -1.04
CCSER1-208ENST00000509109 BAZ2BQ9UIF8 2168 aaKnown RBP8.56□□□□□ -1.04
CCSER1-208ENST00000509109 CCDC69A6NI79 296 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 GRXCR1A8MXD5 290 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 KIF28PB7ZC32 967 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 NOP56O00567 594 aaKnown RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 PPP1R11O60927 126 aaPredicted RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 PPFIA4O75335 1185 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 IQCF3P0C7M6 154 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 CALM1P0DP23 149 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 CALM2P0DP24 149 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 CALM3P0DP25 149 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 MYCLP12524 364 aaPredicted RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 FSTP19883 344 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 SMARCA1P28370 1054 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 KCNJ6P48051 423 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 IRX6P78412 446 aaPredicted RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 ORC1Q13415 861 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 PGM5Q15124 567 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 NFXL1Q6ZNB6 911 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 DEFB128Q7Z7B8 93 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 PHOSPHO2Q8TCD6 241 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 TBC1D5Q92609 795 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 RRP36Q96EU6 259 aaKnown RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 TMEM87BQ96K49 555 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 PIGSQ96S52 555 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 SPZ1Q9BXG8 430 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 FTOQ9C0B1 505 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 BHLHE41Q9C0J9 482 aaPredicted RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 RAXQ9Y2V3 346 aa8.55□□□□□ -1.04
CCSER1-208ENST00000509109 TRIP12Q14669 1992 aaPredicted RBP8.55□□□□□ -1.04
CCSER1-208ENST00000509109 FRMPD4Q14CM0 1322 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 PRC1O43663 620 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 EFCAB14O75071 495 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 GGPS1O95749 300 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 ZNF286BP0CG31 522 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 UBA1P22314 1058 aaKnown RBP8.54□□□□□ -1.04
CCSER1-208ENST00000509109 HOXA13P31271 388 aaPredicted RBP8.54□□□□□ -1.04
CCSER1-208ENST00000509109 RBL2Q08999 1139 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 KIAA0753Q2KHM9 967 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 ARTNQ5T4W7 220 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 XRRA1Q6P2D8 792 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 LRRC8DQ7L1W4 858 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 VSIG10LQ86VR7 867 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 MB21D2Q8IYB1 491 aaPredicted RBP8.54□□□□□ -1.04
CCSER1-208ENST00000509109 ZNF654Q8IZM8 581 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 SMARCC2Q8TAQ2 1214 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 SPATA33Q96N06 139 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 RUSC1Q9BVN2 902 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 NKX2-4Q9H2Z4 354 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 PRDM12Q9H4Q4 367 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 ZFP64Q9NPA5 681 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 THEGQ9P2T0 379 aa8.54□□□□□ -1.04
CCSER1-208ENST00000509109 NCOR1O75376 2440 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 A0A1W2PP55 124 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 DHX15O43143 795 aaKnown RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 SART1O43290 800 aaKnown RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 FIBPO43427 364 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 CYTH3O43739 400 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 NEDD9Q14511 834 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 BMP2KLQ5H9B9 411 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 CELF3Q5SZQ8 465 aaKnown RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 CNKSR3Q6P9H4 555 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 METTL7BQ6UX53 244 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 SYNE3Q6ZMZ3 975 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 TEX2Q8IWB9 1127 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 GALNT12Q8IXK2 581 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 KAT2BQ92831 832 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 FAM46AQ96IP4 442 aaKnown RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 CDHR1Q96JP9 859 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 USP26Q9BXU7 913 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 LIN7BQ9HAP6 207 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 LY9Q9HBG7 655 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 STOML1Q9UBI4 398 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 ZNF215Q9UL58 517 aaPredicted RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 YBX2Q9Y2T7 364 aaKnown RBP8.53□□□□□ -1.04
CCSER1-208ENST00000509109 SLC12A7Q9Y666 1083 aa8.53□□□□□ -1.04
CCSER1-208ENST00000509109 DOCK5Q9H7D0 1870 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 ABHD14A-ACY1A0A1B0GW23 586 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 HAS3O00219 553 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 SH2B2O14492 632 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-208ENST00000509109 CAND2O75155 1236 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 CA3P07451 260 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 ESRRAP11474 423 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-208ENST00000509109 GNAT1P11488 350 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 CKBP12277 381 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 ICAM3P32942 547 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 LIFRP42702 1097 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 RABGGTBP53611 331 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 ANTXR2P58335 489 aa8.52□□□□□ -1.05
CCSER1-208ENST00000509109 SPRED3Q2MJR0 410 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms