RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 CPB2Q96IY4 423 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 CDCA3Q99618 268 aaPredicted RBP24.54■■□□□ 1.52
PACRGL-220ENST00000508952 NRDE2Q9H7Z3 1164 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 NGRNQ9NPE2 291 aaKnown RBP24.54■■□□□ 1.52
PACRGL-220ENST00000508952 GPRC5CQ9NQ84 441 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 RAPGEFL1Q9UHV5 662 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 C19orf67A6NJJ6 358 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 PI4K2BG5E9Z4 385 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 B4GALT3O60512 393 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 XRCC6P12956 609 aaKnown RBP eCLIP24.53■■□□□ 1.52
PACRGL-220ENST00000508952 AFF1P51825 1210 aaKnown RBP24.53■■□□□ 1.52
PACRGL-220ENST00000508952 MBTD1Q05BQ5 628 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 RSPH1Q8WYR4 309 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 POLR3CQ9BUI4 534 aaPredicted RBP24.53■■□□□ 1.52
PACRGL-220ENST00000508952 EIF2AQ9BY44 585 aaKnown RBP24.53■■□□□ 1.52
PACRGL-220ENST00000508952 RSAD1Q9HA92 442 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 DNAJB4Q9UDY4 337 aa24.53■■□□□ 1.52
PACRGL-220ENST00000508952 NOL7Q9UMY1 257 aaKnown RBP24.53■■□□□ 1.52
PACRGL-220ENST00000508952 FAM86C2PA6NEL3 165 aa24.52■■□□□ 1.52
PACRGL-220ENST00000508952 U2AF2P26368 475 aaKnown RBP eCLIP24.52■■□□□ 1.527e-11■■■■□ 26.7
PACRGL-220ENST00000508952 LLGL2Q6P1M3 1020 aa24.52■■□□□ 1.52
PACRGL-220ENST00000508952 ZNF280BQ86YH2 543 aa24.52■■□□□ 1.52
PACRGL-220ENST00000508952 IFNLR1Q8IU57 520 aaPredicted RBP24.52■■□□□ 1.52
PACRGL-220ENST00000508952 SMG8Q8ND04 991 aaKnown RBP24.52■■□□□ 1.52
PACRGL-220ENST00000508952 ERMNQ8TAM6 284 aa24.52■■□□□ 1.52
PACRGL-220ENST00000508952 URGCPQ8TCY9 931 aa24.52■■□□□ 1.52
PACRGL-220ENST00000508952 BCL7CQ8WUZ0 217 aaPredicted RBP24.52■■□□□ 1.52
PACRGL-220ENST00000508952 TMEM169Q96HH4 297 aa24.52■■□□□ 1.52
PACRGL-220ENST00000508952 DBR1Q9UK59 544 aaKnown RBP24.52■■□□□ 1.52
PACRGL-220ENST00000508952 USP15Q9Y4E8 981 aaPredicted RBP24.52■■□□□ 1.52
PACRGL-220ENST00000508952 ST18O60284 1047 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 CD2BP2O95400 341 aaKnown RBP24.51■■□□□ 1.51
PACRGL-220ENST00000508952 GALTP07902 379 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 TRAPPC10P48553 1259 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 POU5F1BQ06416 359 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 SMC1AQ14683 1233 aaKnown RBP24.51■■□□□ 1.51
PACRGL-220ENST00000508952 AMHR2Q16671 573 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 NOTUMQ6P988 496 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 C4orf32Q8N8J7 132 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 NACC1Q96RE7 527 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 C11orf16Q9NQ32 467 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 IPPQ9Y573 584 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 CNTNAP2Q9UHC6 1331 aa24.51■■□□□ 1.51
PACRGL-220ENST00000508952 FSD2A1L4K1 749 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 C2orf71A6NGG8 1288 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 B4GALT5O43286 388 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 NCLP19338 710 aaKnown RBP24.5■■□□□ 1.51
PACRGL-220ENST00000508952 RPA1P27694 616 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 CA8P35219 290 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 SLC11A1P49279 550 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 TOB1P50616 345 aaPredicted RBP24.5■■□□□ 1.51
PACRGL-220ENST00000508952 KCNC3Q14003 757 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 PCBP1Q15365 356 aaKnown RBP eCLIP24.5■■□□□ 1.51
PACRGL-220ENST00000508952 AUTS2Q8WXX7 1259 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 IGSF21Q96ID5 467 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 LRFN3Q9BTN0 628 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 HES2Q9Y543 173 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 PCDHB6Q9Y5E3 794 aa24.5■■□□□ 1.51
PACRGL-220ENST00000508952 LRRIQ4A6NIV6 560 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 DDHD2O94830 711 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 POMCP01189 267 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 ITGA4P13612 1032 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 ARF4P18085 180 aaPredicted RBP24.49■■□□□ 1.51
PACRGL-220ENST00000508952 AXLP30530 894 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 NCBP1Q09161 790 aaKnown RBP24.49■■□□□ 1.51
PACRGL-220ENST00000508952 TMEM31Q5JXX7 168 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 VPS52Q8N1B4 723 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 MRPL43Q8N983 215 aaKnown RBP24.49■■□□□ 1.51
PACRGL-220ENST00000508952 POP1Q99575 1024 aaKnown RBP24.49■■□□□ 1.51
PACRGL-220ENST00000508952 NFKBIZQ9BYH8 718 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 RNF39Q9H2S5 420 aa24.49■■□□□ 1.51
PACRGL-220ENST00000508952 SRGAP2BP0DMP2 458 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 FXR2P51116 673 aaKnown RBP eCLIP24.48■■□□□ 1.51
PACRGL-220ENST00000508952 ECM1Q16610 540 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 PADI6Q6TGC4 694 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 CDR2LQ86X02 465 aaPredicted RBP24.48■■□□□ 1.51
PACRGL-220ENST00000508952 CNNM3Q8NE01 707 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 MCPH1Q8NEM0 835 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 CCDC51Q96ER9 411 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 TMX3Q96JJ7 454 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 APOL6Q9BWW8 343 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 ZBP1Q9H171 429 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 CSRNP2Q9H175 543 aa24.48■■□□□ 1.51
PACRGL-220ENST00000508952 UPF2Q9HAU5 1272 aaKnown RBP24.48■■□□□ 1.51
PACRGL-220ENST00000508952 TRIOO75962 3097 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 ARHGEF35A5YM69 484 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 CXCL14O95715 111 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 CCT6AP40227 531 aaKnown RBP24.47■■□□□ 1.51
PACRGL-220ENST00000508952 PTGDRQ13258 359 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 HAUS3Q68CZ6 603 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 ANKRD54Q6NXT1 300 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 TMEM184AQ6ZMB5 413 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 DDX53Q86TM3 631 aaKnown RBP24.47■■□□□ 1.51
PACRGL-220ENST00000508952 BSNDQ8WZ55 320 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 APOL5Q9BWW9 433 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 VN1R3Q9BXE9 311 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 LRWD1Q9UFC0 647 aa24.47■■□□□ 1.51
PACRGL-220ENST00000508952 TDRD15B5MCY1 1934 aaKnown RBP24.47■■□□□ 1.51
PACRGL-220ENST00000508952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.46■■□□□ 1.51
PACRGL-220ENST00000508952 DCXO43602 365 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms