RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 COPS6Q7L5N1 327 aa4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 RTKN2Q8IZC4 609 aa4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 CLEC4DQ8WXI8 215 aa4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 EPB41L4AQ9HCS5 686 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 DDX21Q9NR30 783 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 DSEQ9UL01 958 aa4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 LAS1LQ9Y4W2 734 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 ABCC12Q96J65 1359 aa4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 IBTKQ9P2D0 1353 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-226ENST00000508635 RIC1Q4ADV7 1423 aa4.46□□□□□ -1.69
UBE2D3-226ENST00000508635 SBF1O95248 1867 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 TNRC6CQ9HCJ0 1690 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 TLDC2A0PJX2 215 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 OPA1O60313 960 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 DNAJC8O75937 253 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 CKMP06732 381 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 C8BP07358 591 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 VEGFAP15692 232 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 IGFBP6P24592 240 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 JAM2P57087 298 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 CACNB2Q08289 660 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 FSTL1Q12841 308 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 AIMP1Q12904 312 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 TCIRG1Q13488 830 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 ZNF460Q14592 562 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 CRY1Q16526 586 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 VMACQ2NL98 169 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 FNDC3BQ53EP0 1204 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 PARP10Q53GL7 1025 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 CCDC93Q567U6 631 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 FAM47CQ5HY64 1035 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 CNKSR3Q6P9H4 555 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 C16orf59Q7L2K0 433 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 PPP1R42Q7Z4L9 355 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 FAM129CQ86XR2 697 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 PTRH1Q86Y79 214 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 MIB1Q86YT6 1006 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 FAM126BQ8IXS8 530 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 C16orf71Q8IYS4 520 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 IGSF22Q8N9C0 903 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 UHMK1Q8TAS1 419 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 PHOSPHO1Q8TCT1 267 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 SH3RF2Q8TEC5 729 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 RPGRQ92834 1020 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 PWWP2AQ96N64 755 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 NOX5Q96PH1 765 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 UTP14AQ9BVJ6 771 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 RNF38Q9H0F5 515 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 IFT57Q9NWB7 429 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 CHPF2Q9P2E5 772 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 ASH2LQ9UBL3 628 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 DBF4Q9UBU7 674 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 TELO2Q9Y4R8 837 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 TNPO3Q9Y5L0 923 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 SLX4Q8IY92 1834 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 SNED1Q8TER0 1413 aa4.46□□□□□ -1.7
UBE2D3-226ENST00000508635 ARFGEF2Q9Y6D5 1785 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 NUP98P52948 1817 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 CCER2I3L3R5 266 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 RFXAPO00287 272 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 WNT9AO14904 365 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 DDNO94850 711 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 AMY2AP04746 511 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 CYP2C8P10632 490 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 AMY2BP19961 511 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 GNAI1P63096 354 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 CALD1Q05682 793 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 SMAD4Q13485 552 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 GPR19Q15760 415 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 CR1LQ2VPA4 569 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 ZNF385BQ569K4 471 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 HSP90AB3PQ58FF7 597 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 HABP4Q5JVS0 413 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 EP400NLQ6ZTU2 488 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 B3GNT8Q7Z7M8 397 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 GGNQ86UU5 652 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 DHX37Q8IY37 1157 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 SYNE4Q8N205 404 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 DNAJC5GQ8N7S2 189 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 C8orf58Q8NAV2 365 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 SMC1BQ8NDV3 1235 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 PLBD2Q8NHP8 589 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 CPA5Q8WXQ8 436 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 TOE1Q96GM8 510 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 RBM17Q96I25 401 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 PSMD1Q99460 953 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 PARD6AQ9NPB6 346 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 ZNF277Q9NRM2 450 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 DTLQ9NZJ0 730 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 RBPJLQ9UBG7 517 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 TMA7Q9Y2S6 64 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 PMF1-BGLAPU3KQ54 211 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 TIAM2Q8IVF5 1701 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 FER1L6Q2WGJ9 1857 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 RNF123Q5XPI4 1314 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 SH3TC1Q8TE82 1336 aa4.45□□□□□ -1.7
UBE2D3-226ENST00000508635 WDR90Q96KV7 1748 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 FZD9O00144 591 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms