RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 GPR37L1O60883 481 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 OFD1O75665 1012 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 HOXB8P17481 243 aaPredicted RBP17.34■□□□□ 0.37
DDR1-264ENST00000508472 MUTP22033 750 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 CA8P35219 290 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 TECP42680 631 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 ST3GAL1Q11201 340 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 C8orf34Q49A92 452 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 TTC38Q5R3I4 469 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
DDR1-264ENST00000508472 IFNLR1Q8IU57 520 aaPredicted RBP17.34■□□□□ 0.37
DDR1-264ENST00000508472 CASP10Q92851 521 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
DDR1-264ENST00000508472 CD320Q9NPF0 282 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 TBC1D13Q9NVG8 400 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 DBR1Q9UK59 544 aaKnown RBP17.34■□□□□ 0.37
DDR1-264ENST00000508472 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
DDR1-264ENST00000508472 DCXO43602 365 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 NR1I2O75469 434 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 ITGA4P13612 1032 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
DDR1-264ENST00000508472 ARL2P36404 184 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 PBX3P40426 434 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 LONRF3Q496Y0 759 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 MRPL43Q8N983 215 aaKnown RBP17.33■□□□□ 0.36
DDR1-264ENST00000508472 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 TMEM175Q9BSA9 504 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 MINDY3Q9H8M7 445 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 BARX2Q9UMQ3 279 aaPredicted RBP17.33■□□□□ 0.36
DDR1-264ENST00000508472 PCDHGC5Q9Y5F6 944 aa17.33■□□□□ 0.36
DDR1-264ENST00000508472 TSPAN1O60635 241 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 USO1O60763 962 aaKnown RBP17.32■□□□□ 0.36
DDR1-264ENST00000508472 GLP2RO95838 553 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 ALDH2P05091 517 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 RPA1P27694 616 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 HOXA11P31270 313 aaPredicted RBP17.32■□□□□ 0.36
DDR1-264ENST00000508472 ZNF174Q15697 407 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
DDR1-264ENST00000508472 CATSPER3Q86XQ3 398 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 ZBTB8OSQ8IWT0 167 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 VPS52Q8N1B4 723 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 IGSF21Q96ID5 467 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 LRFN3Q9BTN0 628 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 GBP3Q9H0R5 595 aa17.32■□□□□ 0.36
DDR1-264ENST00000508472 POLR3FQ9H1D9 316 aaPredicted RBP17.32■□□□□ 0.36
DDR1-264ENST00000508472 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 HIDE1A8MVS5 230 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 NT5C1B-RDH14C9J2C7 533 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 LAD1O00515 517 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 WNT7AO00755 349 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 CXCL14O95715 111 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 GALTP07902 379 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 MCM2P49736 904 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 CAPSQ13938 189 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 CES5AQ6NT32 575 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 ANKRD54Q6NXT1 300 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 PRIMPOLQ96LW4 560 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 KIF2CQ99661 725 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 CSRNP2Q9H175 543 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 C2orf40Q9H1Z8 148 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 NRDE2Q9H7Z3 1164 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
DDR1-264ENST00000508472 USP15Q9Y4E8 981 aaPredicted RBP17.31■□□□□ 0.36
DDR1-264ENST00000508472 C2orf71A6NGG8 1288 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 LRRIQ4A6NIV6 560 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 PRR33A8MZF0 331 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 GLRA2P23416 452 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDR1-264ENST00000508472 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■■■□□ 17.5
DDR1-264ENST00000508472 MBTD1Q05BQ5 628 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 PDIA5Q14554 519 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 AGMOQ6ZNB7 445 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 ASAP3Q8TDY4 903 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 PHF7Q9BWX1 381 aaPredicted RBP17.3■□□□□ 0.36
DDR1-264ENST00000508472 PRMT7Q9NVM4 692 aaPredicted RBP17.3■□□□□ 0.36
DDR1-264ENST00000508472 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 SSX2IPQ9Y2D8 614 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 IPPQ9Y573 584 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
DDR1-264ENST00000508472 ZMYM2Q9UBW7 1377 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.29■□□□□ 0.36
DDR1-264ENST00000508472 MED24O75448 989 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 CTSAP10619 480 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 ITIH3Q06033 890 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 KCNC3Q14003 757 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 CBX2Q14781 532 aaPredicted RBP17.29■□□□□ 0.36
DDR1-264ENST00000508472 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 LLGL2Q6P1M3 1020 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 SLC27A1Q6PCB7 646 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 ELMSAN1Q6PJG2 1045 aa17.29■□□□□ 0.36
DDR1-264ENST00000508472 KHSRPQ92945 711 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDR1-264ENST00000508472 NECTIN4Q96NY8 510 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms