RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 GBP3Q9H0R5 595 aa15.88■□□□□ 0.13
RAB28-205ENST00000508274 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
RAB28-205ENST00000508274 DNAJB4Q9UDY4 337 aa15.88■□□□□ 0.13
RAB28-205ENST00000508274 PUF60Q9UHX1 559 aaKnown RBP15.88■□□□□ 0.13
RAB28-205ENST00000508274 FAM86C2PA6NEL3 165 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 INO80B-WBP1J3KQ70 363 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 TSPAN1O60635 241 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 EYA4O95677 639 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 KRT17Q04695 432 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 MBTD1Q05BQ5 628 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 RABEP1Q15276 862 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 PDE12Q6L8Q7 609 aaKnown RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 TMC7Q7Z402 723 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 ZNF280BQ86YH2 543 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 BCL7CQ8WUZ0 217 aaPredicted RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 TUFT1Q9NNX1 390 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 C11orf16Q9NQ32 467 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 PRKAG3Q9UGI9 489 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 TDRD15B5MCY1 1934 aaKnown RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 RNASELQ05823 741 aaKnown RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 COASYQ13057 564 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 ORC2Q13416 577 aaPredicted RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 KCNC3Q14003 757 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 TFDP1Q14186 410 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 AMHR2Q16671 573 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 MRPL10Q7Z7H8 261 aaKnown RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 C4orf32Q8N8J7 132 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 SMG8Q8ND04 991 aaKnown RBP15.87■□□□□ 0.13
RAB28-205ENST00000508274 PGBD4Q96DM1 585 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 C1QTNF1Q9BXJ1 281 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 RSAD1Q9HA92 442 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 HES2Q9Y543 173 aa15.87■□□□□ 0.13
RAB28-205ENST00000508274 PI4K2BG5E9Z4 385 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 B4GALT5O43286 388 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 GALTP07902 379 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 U2AF2P26368 475 aaKnown RBP eCLIP15.86■□□□□ 0.133e-6■■■■■ 27.8
RAB28-205ENST00000508274 RPA1P27694 616 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 SLC11A1P49279 550 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
RAB28-205ENST00000508274 ECM1Q16610 540 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 LLGL2Q6P1M3 1020 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 CDR2LQ86X02 465 aaPredicted RBP15.86■□□□□ 0.13
RAB28-205ENST00000508274 AUTS2Q8WXX7 1259 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 TMEM169Q96HH4 297 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 CDCA3Q99618 268 aaPredicted RBP15.86■□□□□ 0.13
RAB28-205ENST00000508274 POLR3CQ9BUI4 534 aaPredicted RBP15.86■□□□□ 0.13
RAB28-205ENST00000508274 USP15Q9Y4E8 981 aaPredicted RBP15.86■□□□□ 0.13
RAB28-205ENST00000508274 IPPQ9Y573 584 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 PCDHB6Q9Y5E3 794 aa15.86■□□□□ 0.13
RAB28-205ENST00000508274 C2orf71A6NGG8 1288 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 DDHD2O94830 711 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 XRCC6P12956 609 aaKnown RBP eCLIP15.85■□□□□ 0.13
RAB28-205ENST00000508274 ARF4P18085 180 aaPredicted RBP15.85■□□□□ 0.13
RAB28-205ENST00000508274 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
RAB28-205ENST00000508274 CA8P35219 290 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 TRAPPC10P48553 1259 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 VPS52Q8N1B4 723 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 RSPH1Q8WYR4 309 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 IGSF21Q96ID5 467 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 TMX3Q96JJ7 454 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 LRFN3Q9BTN0 628 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 APOL5Q9BWW9 433 aa15.85■□□□□ 0.13
RAB28-205ENST00000508274 NGRNQ9NPE2 291 aaKnown RBP15.85■□□□□ 0.13
RAB28-205ENST00000508274 DBR1Q9UK59 544 aaKnown RBP15.85■□□□□ 0.13
RAB28-205ENST00000508274 NOL7Q9UMY1 257 aaKnown RBP15.85■□□□□ 0.13
RAB28-205ENST00000508274 CNTNAP2Q9UHC6 1331 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 LRRIQ4A6NIV6 560 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 ST18O60284 1047 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 POMCP01189 267 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 POU5F1BQ06416 359 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 PTGDRQ13258 359 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
RAB28-205ENST00000508274 NOTUMQ6P988 496 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 MRPL43Q8N983 215 aaKnown RBP15.84■□□□□ 0.13
RAB28-205ENST00000508274 URGCPQ8TCY9 931 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 BSNDQ8WZ55 320 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 NACC1Q96RE7 527 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 VN1R3Q9BXE9 311 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 NFKBIZQ9BYH8 718 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 ZBP1Q9H171 429 aa15.84■□□□□ 0.13
RAB28-205ENST00000508274 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
RAB28-205ENST00000508274 ITGA4P13612 1032 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 AXLP30530 894 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.13
RAB28-205ENST00000508274 PCBP1Q15365 356 aaKnown RBP eCLIP15.83■□□□□ 0.13
RAB28-205ENST00000508274 TMEM31Q5JXX7 168 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 SYCE2Q6PIF2 218 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 PADI6Q6TGC4 694 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 MCPH1Q8NEM0 835 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 ERMNQ8TAM6 284 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 CSRNP2Q9H175 543 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 POLD4Q9HCU8 107 aa15.83■□□□□ 0.13
RAB28-205ENST00000508274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.83■□□□□ 0.12
RAB28-205ENST00000508274 FSD2A1L4K1 749 aa15.83■□□□□ 0.12
RAB28-205ENST00000508274 ARHGEF35A5YM69 484 aa15.83■□□□□ 0.12
RAB28-205ENST00000508274 TTLL13PA6NNM8 815 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms