RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TISP43B9A030 160 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 ARVCFO00192 962 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 HNRNPDLO14979 420 aaKnown RBP19.13■□□□□ 0.65
RNF4-209ENST00000507784 CSDE1O75534 798 aaKnown RBP19.13■□□□□ 0.65
RNF4-209ENST00000507784 FANCCQ00597 558 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 CCDC40Q4G0X9 1142 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 CDKAL1Q5VV42 579 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 CEP135Q66GS9 1140 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 ARMCX5Q6P1M9 558 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 FOXR2Q6PJQ5 311 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 SRGAP1Q7Z6B7 1085 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 CEP63Q96MT8 703 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 TARS2Q9BW92 718 aaKnown RBP19.13■□□□□ 0.65
RNF4-209ENST00000507784 CRISPLD2Q9H0B8 497 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 CCDC113Q9H0I3 377 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 ADAMTS10Q9H324 1103 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 CDHR5Q9HBB8 845 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 IFT122Q9HBG6 1241 aa19.13■□□□□ 0.65
RNF4-209ENST00000507784 TRMT13Q9NUP7 481 aaKnown RBP19.13■□□□□ 0.65
RNF4-209ENST00000507784 CGNQ9P2M7 1197 aaKnown RBP19.13■□□□□ 0.65
RNF4-209ENST00000507784 TULP1O00294 542 aaPredicted RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 GPR32O75388 356 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 ZNF18P17022 549 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 MTIF2P46199 727 aaKnown RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 MBTD1Q05BQ5 628 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 SPAG1Q07617 926 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 PTK7Q13308 1070 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 PRPF4BQ13523 1007 aaKnown RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 FILIP1Q7Z7B0 1213 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 SERINC5Q86VE9 423 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 CNOT6LQ96LI5 555 aaKnown RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 OSMRQ99650 979 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 MRPL4Q9BYD3 311 aaKnown RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 NFKBIZQ9BYH8 718 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 TRIM5Q9C035 493 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 MCOLN1Q9GZU1 580 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 MINDY3Q9H8M7 445 aa19.12■□□□□ 0.65
RNF4-209ENST00000507784 PRMT7Q9NVM4 692 aaPredicted RBP19.12■□□□□ 0.65
RNF4-209ENST00000507784 AP5Z1O43299 807 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 EXOC3O60645 756 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 THPOP40225 353 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 MRPS6P82932 125 aaKnown RBP19.11■□□□□ 0.65
RNF4-209ENST00000507784 TCP11X2Q5H9J9 407 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 LRRC55Q6ZSA7 311 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 IFNLR1Q8IU57 520 aaPredicted RBP19.11■□□□□ 0.65
RNF4-209ENST00000507784 IRF2BP1Q8IU81 584 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 SLC43A3Q8NBI5 491 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 POMGNT1Q8WZA1 660 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 TCHPQ9BT92 498 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 CELF4Q9BZC1 486 aaKnown RBP19.11■□□□□ 0.65
RNF4-209ENST00000507784 TRPV6Q9H1D0 765 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 FZD8Q9H461 694 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 TRPV2Q9Y5S1 764 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 CDY2AQ9Y6F7 541 aa19.11■□□□□ 0.65
RNF4-209ENST00000507784 ACKR2O00590 384 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 ERLIN2O94905 339 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 EDN1P05305 212 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 TPM2P07951 284 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 CTSHP09668 335 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 FGFR4P22455 802 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 EEF1GP26641 437 aaKnown RBP19.1■□□□□ 0.65
RNF4-209ENST00000507784 GJA8P48165 433 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 CRYBB1P53674 252 aaPredicted RBP19.1■□□□□ 0.65
RNF4-209ENST00000507784 ATN1P54259 1190 aaPredicted RBP19.1■□□□□ 0.65
RNF4-209ENST00000507784 NFIL3Q16649 462 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 SLFN12LQ6IEE8 588 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 SLC39A4Q6P5W5 647 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 ZBTB33Q86T24 672 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 ZNF710Q8N1W2 664 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 RDH13Q8NBN7 331 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 KCNN1Q92952 543 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 WNT8BQ93098 351 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 ZBTB45Q96K62 511 aaPredicted RBP19.1■□□□□ 0.65
RNF4-209ENST00000507784 CBWD1Q9BRT8 395 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 SEZ6LQ9BYH1 1024 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 TAB2Q9NYJ8 693 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 HSPBP1Q9NZL4 362 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 IFNKQ9P0W0 207 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 FRMD4BQ9Y2L6 1034 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 PCNTO95613 3336 aa19.1■□□□□ 0.65
RNF4-209ENST00000507784 GOLGA8IPA6NC78 632 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 GOLGA8JA6NMD2 632 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 PES1O00541 588 aaKnown RBP19.09■□□□□ 0.65
RNF4-209ENST00000507784 B4GALT5O43286 388 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 B4GALT4O60513 344 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 GNA14O95837 355 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 PIGRP01833 764 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 RPLP2P05387 115 aaKnown RBP19.09■□□□□ 0.65
RNF4-209ENST00000507784 EPB41P11171 864 aaKnown RBP19.09■□□□□ 0.65
RNF4-209ENST00000507784 HARSP12081 509 aaKnown RBP19.09■□□□□ 0.65
RNF4-209ENST00000507784 CASP4P49662 377 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 UBASH3AP57075 661 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 MYBPC2Q14324 1141 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 KRT31Q15323 416 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 FILIP1LQ4L180 1135 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 ZPBP2Q6X784 338 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 CATSPER4Q7RTX7 472 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 SLC9A9Q8IVB4 645 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 ZC3H3Q8IXZ2 948 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms