RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 NLRP11P59045 1033 aaKnown RBP8.24□□□□□ -1.09
VCAN-207ENST00000507162 C19orf57Q0VDD7 668 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 TRAF1Q13077 416 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 ALX1Q15699 326 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 CCDC178Q5BJE1 867 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 NOMO2Q5JPE7 1267 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 DAB2IPQ5VWQ8 1189 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 USP17L6PQ6QN14 398 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 PLPPR4Q7Z2D5 763 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 LONP2Q86WA8 852 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 ZNF280BQ86YH2 543 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 GLIS3Q8NEA6 775 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 PANK1Q8TE04 598 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 HNRNPLLQ8WVV9 542 aaKnown RBP8.24□□□□□ -1.09
VCAN-207ENST00000507162 PIBF1Q8WXW3 757 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 ESR2Q92731 530 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 FGF13Q92913 245 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 CUL5Q93034 780 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 GPRASP2Q96D09 838 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 CDHR1Q96JP9 859 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 FAM193BQ96PV7 902 aaPredicted RBP8.24□□□□□ -1.09
VCAN-207ENST00000507162 RPS6KC1Q96S38 1066 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 PIGSQ96S52 555 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 MKNK1Q9BUB5 465 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 PLEKHA4Q9H4M7 779 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 TBC1D13Q9NVG8 400 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 SLC9A2Q9UBY0 812 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 POLIQ9UNA4 740 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 FAN1Q9Y2M0 1017 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 MYH6P13533 1939 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 TENM4Q6N022 2769 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 PIEZO2Q9H5I5 2752 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 KALRNO60229 2985 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 PATJQ8NI35 1801 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 CACNA1EQ15878 2313 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 MAN2B1O00754 1011 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 BACH1O14867 736 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 HBP1O60381 514 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 ITGB5P18084 799 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 ACTR2P61160 394 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 MTMR1Q13613 665 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 TCEAL6Q6IPX3 200 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 GLB1LQ6UWU2 654 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 IQCA1Q86XH1 822 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 ITFG1Q8TB96 612 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 FAM3CQ92520 227 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 TCEAL3Q969E4 200 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 MTMR8Q96EF0 704 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 LRIG1Q96JA1 1093 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 SCLT1Q96NL6 688 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 PLA2G2FQ9BZM2 168 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 JPH1Q9HDC5 661 aaPredicted RBP8.23□□□□□ -1.09
VCAN-207ENST00000507162 ZDHHC7Q9NXF8 308 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 STK39Q9UEW8 545 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 AKT3Q9Y243 479 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 EVPLQ92817 2033 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 WDFY3Q8IZQ1 3526 aa8.23□□□□□ -1.09
VCAN-207ENST00000507162 LAMA4Q16363 1823 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 URB1O60287 2271 aaKnown RBP8.22□□□□□ -1.09
VCAN-207ENST00000507162 SHISA7A6NL88 538 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 TGM5O43548 720 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 CSDE1O75534 798 aaKnown RBP8.22□□□□□ -1.09
VCAN-207ENST00000507162 OFD1O75665 1012 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 DDHD2O94830 711 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 SOD2P04179 222 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 PRB1P04280 392 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 CEACAM1P13688 526 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 EIF4BP23588 611 aaKnown RBP8.22□□□□□ -1.09
VCAN-207ENST00000507162 HOXC13P31276 330 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 TROAPQ12815 778 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 ZNF484Q5JVG2 852 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 LARP1BQ659C4 914 aaKnown RBP8.22□□□□□ -1.09
VCAN-207ENST00000507162 CACNA2D4Q7Z3S7 1137 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 TBC1D10CQ8IV04 446 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 HDAC7Q8WUI4 952 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 MCRS1Q96EZ8 462 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 ZSCAN10Q96SZ4 725 aaPredicted RBP8.22□□□□□ -1.09
VCAN-207ENST00000507162 EDEM2Q9BV94 578 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 RNF41Q9H4P4 317 aaPredicted RBP8.22□□□□□ -1.09
VCAN-207ENST00000507162 DACT1Q9NYF0 836 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 KLK13Q9UKR3 277 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 MSRB2Q9Y3D2 182 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 NEUROG3Q9Y4Z2 214 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 FRMPD4Q14CM0 1322 aa8.22□□□□□ -1.09
VCAN-207ENST00000507162 MYH15Q9Y2K3 1946 aa8.21□□□□□ -1.09
VCAN-207ENST00000507162 PNMA6FA0A0J9YX94 578 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 MEIS3P2A8K0S8 358 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 NRP1O14786 923 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 CCL16O15467 120 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 B4GALT3O60512 393 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 ZMYND10O75800 440 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 EPN2O95208 641 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 MPLP40238 635 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 PHKA2P46019 1235 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 GLUD2P49448 558 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 CLCN3P51790 818 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 UAP1L1Q3KQV9 507 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 KBTBD6Q86V97 674 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 PROSER1Q86XN7 944 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms