RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ADD2P35612 726 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 EIF2S3P41091 472 aaKnown RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 PPFIA1Q13136 1202 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 CCINQ13939 588 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 C4orf17Q53FE4 359 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 IER5Q5VY09 327 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TANGO2Q6ICL3 276 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 PDXDC1Q6P996 788 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TXNDC11Q6PKC3 985 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 METTL7BQ6UX53 244 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 FAM43BQ6ZT52 329 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 SPATA31D4Q6ZUB0 917 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TMPRSS7Q7RTY8 843 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 GRASPQ7Z6J2 395 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 VSIG10LQ86VR7 867 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 ECHDC2Q86YB7 292 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 WDR63Q8IWG1 891 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 HDAC7Q8WUI4 952 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 SSH1Q8WYL5 1049 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TTC9Q92623 222 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 CAMK1GQ96NX5 476 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 EMILIN2Q9BXX0 1053 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TRIM4Q9C037 500 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 MAF1Q9H063 256 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 FAM49AQ9H0Q0 323 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 SLC32A1Q9H598 525 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 NRDE2Q9H7Z3 1164 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 RXFP1Q9HBX9 757 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 EPB41L4AQ9HCS5 686 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TRPV5Q9NQA5 729 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 POLR3BQ9NW08 1133 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 ZDHHC7Q9NXF8 308 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TOR4AQ9NXH8 423 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 DNAJB4Q9UDY4 337 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 EVLQ9UI08 416 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 MBD1Q9UIS9 605 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 SVILO95425 2214 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 MYH9P35579 1960 aaKnown RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 CSMD2Q7Z408 3487 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 HIVEP1P15822 2718 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 PDZD2O15018 2839 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ABCA2Q9BZC7 2435 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 GSTTP1A0A1W2PQM5 241 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 DENND3A2RUS2 1198 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 SPDYE4A6NLX3 237 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 HOXA2O43364 376 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 TGM5O43548 720 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ZC3H11AO75152 810 aaKnown RBP eCLIP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 GJB3O75712 270 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 GLUD1P00367 558 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 C1RP00736 705 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 SSBP05455 408 aaKnown RBP eCLIP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 CCDC192P0DO97 292 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 CCNE1P24864 410 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 SLC11A1P49279 550 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 HSD17B4P51659 736 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 MRPS9P82933 396 aaKnown RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 KRT76Q01546 638 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 POLA2Q14181 598 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 LY6DQ14210 128 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 BMS1Q14692 1282 aaKnown RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PGM5Q15124 567 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 USH1GQ495M9 461 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 UTP14CQ5TAP6 766 aaKnown RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PMS2CLQ68D20 193 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 KCNV1Q6PIU1 500 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 STOX1Q6ZVD7 989 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 CYFIP1Q7L576 1253 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 TAS1R1Q7RTX1 841 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 GPR155Q7Z3F1 870 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 DAGLBQ8NCG7 672 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 HELQQ8TDG4 1101 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 DCAF4Q8WV16 495 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 TRAPPC12Q8WVT3 735 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PHKBQ93100 1093 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ELSPBP1Q96BH3 223 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 MBOAT7Q96N66 472 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 DCBLD2Q96PD2 775 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 RPS6KC1Q96S38 1066 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PCYT2Q99447 389 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PUS7LQ9H0K6 701 aaKnown RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PLEKHA4Q9H4M7 779 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 MLXIPQ9HAP2 919 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 MKNK2Q9HBH9 465 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ZNF334Q9HCZ1 680 aaPredicted RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 POLMQ9NP87 494 aaPredicted RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 CHST12Q9NRB3 414 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 MARCH5Q9NX47 278 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ZNF215Q9UL58 517 aaPredicted RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ISY1Q9ULR0 285 aaKnown RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PAXBP1Q9Y5B6 917 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PCDHA2Q9Y5H9 948 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 SLC4A4Q9Y6R1 1079 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 PIAS3Q9Y6X2 628 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 MYO18AQ92614 2054 aaKnown RBP3.91□□□□□ -1.78
TCOF1-208ENST00000506063 ZMYM6O95789 1325 aa3.91□□□□□ -1.78
TCOF1-208ENST00000506063 NUP210Q8TEM1 1887 aaPredicted RBP3.9□□□□□ -1.78
TCOF1-208ENST00000506063 A0A1B0GTL3 188 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 MEIS3P2A8K0S8 358 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms