RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PI4K2BG5E9Z4 385 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 FSCN2O14926 492 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 LINC01565O15544 149 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 OR52Z1P0C646 297 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-222ENST00000506018 ATF7P17544 494 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-222ENST00000506018 GTF2F1P35269 517 aaKnown RBP eCLIP11.58□□□□□ -0.56
NR1I3-222ENST00000506018 BCAR1P56945 870 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 ERVFC1P60507 584 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 DLX2Q07687 328 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-222ENST00000506018 COASYQ13057 564 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 GIT2Q14161 759 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 DUSP6Q16828 381 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 HAUS3Q68CZ6 603 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 SLC39A11Q8N1S5 342 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
NR1I3-222ENST00000506018 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 TRIM6Q9C030 488 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-222ENST00000506018 RSAD1Q9HA92 442 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 PCDHB2Q9Y5E7 798 aa11.58□□□□□ -0.56
NR1I3-222ENST00000506018 INO80B-WBP1J3KQ70 363 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 PER2O15055 1255 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 EYA4O95677 639 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 MUTP22033 750 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 TECP42680 631 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 MCM2P49736 904 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 RARRES1P49788 294 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 PTENP60484 403 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 ZP2Q05996 745 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 ST3GAL1Q11201 340 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 BECN1Q14457 450 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 TTC38Q5R3I4 469 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 NOSTRINQ8IVI9 506 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 SMRP1Q8NCR6 262 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 MCPH1Q8NEM0 835 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 LPPQ93052 612 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 MSLNLQ96KJ4 702 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 POLR3CQ9BUI4 534 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-222ENST00000506018 EPHX3Q9H6B9 360 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 HCN4Q9Y3Q4 1203 aa11.57□□□□□ -0.56
NR1I3-222ENST00000506018 RBM19Q9Y4C8 960 aaKnown RBP11.57□□□□□ -0.56
NR1I3-222ENST00000506018 ZBTB39O15060 712 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 DCXO43602 365 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 USO1O60763 962 aaKnown RBP11.56□□□□□ -0.56
NR1I3-222ENST00000506018 NR1I2O75469 434 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 OFD1O75665 1012 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 ITGA4P13612 1032 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 HOXB8P17481 243 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-222ENST00000506018 PBX3P40426 434 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 ZNF174Q15697 407 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 LONRF3Q496Y0 759 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 ZBTB8OSQ8IWT0 167 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 PIGOQ8TEQ8 1089 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 CASP10Q92851 521 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 TMEM175Q9BSA9 504 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 NFKBIZQ9BYH8 718 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 GBP3Q9H0R5 595 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 TMEM60Q9H2L4 133 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 TBC1D13Q9NVG8 400 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 CLEC1BQ9P126 229 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-222ENST00000506018 DBR1Q9UK59 544 aaKnown RBP11.56□□□□□ -0.56
NR1I3-222ENST00000506018 BARX2Q9UMQ3 279 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-222ENST00000506018 PCDHGC5Q9Y5F6 944 aa11.56□□□□□ -0.56
NR1I3-222ENST00000506018 ARHGEF35A5YM69 484 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 LRRIQ4A6NIV6 560 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 NT5C1B-RDH14C9J2C7 533 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 LAD1O00515 517 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 GPR37L1O60883 481 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 ALDH2P05091 517 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 PYGBP11216 843 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
NR1I3-222ENST00000506018 RPA1P27694 616 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 ARL2P36404 184 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 CAPSQ13938 189 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 TMEM132AQ24JP5 1023 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 TMEM184AQ6ZMB5 413 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 MRPL10Q7Z7H8 261 aaKnown RBP11.55□□□□□ -0.56
NR1I3-222ENST00000506018 DDX53Q86TM3 631 aaKnown RBP11.55□□□□□ -0.56
NR1I3-222ENST00000506018 CATSPER3Q86XQ3 398 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 MRPL43Q8N983 215 aaKnown RBP11.55□□□□□ -0.56
NR1I3-222ENST00000506018 IGSF21Q96ID5 467 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
NR1I3-222ENST00000506018 C2orf40Q9H1Z8 148 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 NRDE2Q9H7Z3 1164 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 CD320Q9NPF0 282 aa11.55□□□□□ -0.56
NR1I3-222ENST00000506018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 C2orf71A6NGG8 1288 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 WNT7AO00755 349 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 TSPAN1O60635 241 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 CXCL14O95715 111 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 GLP2RO95838 553 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 GALTP07902 379 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms