RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 NEK4P51957 841 aa27.52■■■□□ 2
HERC4-212ENST00000505760 FOSBP53539 338 aa27.52■■■□□ 2
HERC4-212ENST00000505760 GIT2Q14161 759 aa27.52■■■□□ 2
HERC4-212ENST00000505760 AGMOQ6ZNB7 445 aa27.52■■■□□ 2
HERC4-212ENST00000505760 NSUN7Q8NE18 718 aaKnown RBP27.52■■■□□ 2
HERC4-212ENST00000505760 AUTS2Q8WXX7 1259 aa27.52■■■□□ 2
HERC4-212ENST00000505760 EIF2AK1Q9BQI3 630 aaKnown RBP27.52■■■□□ 2
HERC4-212ENST00000505760 RSAD1Q9HA92 442 aa27.52■■■□□ 2
HERC4-212ENST00000505760 DNAJB4Q9UDY4 337 aa27.52■■■□□ 2
HERC4-212ENST00000505760 CNTNAP2Q9UHC6 1331 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 BTBD18B2RXH4 712 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 EIF5BO60841 1220 aaKnown RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 CTSAP10619 480 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 SP100P23497 879 aaPredicted RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 HOXA11P31270 313 aaPredicted RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 SLC11A1P49279 550 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 ITIH3Q06033 890 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 MXD4Q14582 209 aaPredicted RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 MRPL10Q7Z7H8 261 aaKnown RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 ZNF280BQ86YH2 543 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 CCDC43Q96MW1 224 aaKnown RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 FAM193BQ96PV7 902 aaPredicted RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 TTC12Q9H892 705 aaPredicted RBP27.51■■□□□ 1.99
HERC4-212ENST00000505760 TSHZ2Q9NRE2 1034 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 PIEZO1Q92508 2521 aa27.51■■□□□ 1.99
HERC4-212ENST00000505760 NEMFO60524 1076 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 DIS3L2Q8IYB7 885 aaKnown RBP27.5■■□□□ 1.99
HERC4-212ENST00000505760 BCL7CQ8WUZ0 217 aaPredicted RBP27.5■■□□□ 1.99
HERC4-212ENST00000505760 PBXIP1Q96AQ6 731 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 NECTIN4Q96NY8 510 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 ADAM7Q9H2U9 754 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 KANSL3Q9P2N6 904 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 NR2E1Q9Y466 385 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 IRAK3Q9Y616 596 aa27.5■■□□□ 1.99
HERC4-212ENST00000505760 JAK2O60674 1132 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 TXKP42681 527 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 NCBP1Q09161 790 aaKnown RBP27.49■■□□□ 1.99
HERC4-212ENST00000505760 TFDP1Q14186 410 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 PCBP1Q15365 356 aaKnown RBP eCLIP27.49■■□□□ 1.99
HERC4-212ENST00000505760 UBXN11Q5T124 520 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 BMP8AQ7Z5Y6 402 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 ZBTB33Q86T24 672 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 CNNM3Q8NE01 707 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 FBXL18Q96ME1 805 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 HSD17B14Q9BPX1 270 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 XPNPEP1Q9NQW7 623 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 DZANK1Q9NVP4 752 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 CDH22Q9UJ99 828 aa27.49■■□□□ 1.99
HERC4-212ENST00000505760 DGAT1O75907 488 aa27.48■■□□□ 1.99
HERC4-212ENST00000505760 LYPLA2O95372 231 aa27.48■■□□□ 1.99
HERC4-212ENST00000505760 PTENP60484 403 aa27.48■■□□□ 1.99
HERC4-212ENST00000505760 ANKEF1Q9NU02 776 aa27.48■■□□□ 1.99
HERC4-212ENST00000505760 STK39Q9UEW8 545 aa27.48■■□□□ 1.99
HERC4-212ENST00000505760 INO80B-WBP1J3KQ70 363 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 B4GALT3O60512 393 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 DDHD2O94830 711 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 POMCP01189 267 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 ALDH2P05091 517 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 ITGA4P13612 1032 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 NCLP19338 710 aaKnown RBP27.47■■□□□ 1.99
HERC4-212ENST00000505760 AXLP30530 894 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 MTHFRP42898 656 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 AFF1P51825 1210 aaKnown RBP27.47■■□□□ 1.99
HERC4-212ENST00000505760 SIGLEC14Q08ET2 396 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 PTPN21Q16825 1174 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 RARS2Q5T160 578 aaKnown RBP27.47■■□□□ 1.99
HERC4-212ENST00000505760 NOTUMQ6P988 496 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 SUGP1Q8IWZ8 645 aaKnown RBP27.47■■□□□ 1.99
HERC4-212ENST00000505760 RIPOR3Q96MK2 946 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 POMKQ9H5K3 350 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 UBN1Q9NPG3 1134 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 FAN1Q9Y2M0 1017 aa27.47■■□□□ 1.99
HERC4-212ENST00000505760 TSPAN1O60635 241 aa27.46■■□□□ 1.99
HERC4-212ENST00000505760 EPCAMP16422 314 aa27.46■■□□□ 1.99
HERC4-212ENST00000505760 ERICH6BQ5W0A0 696 aa27.46■■□□□ 1.99
HERC4-212ENST00000505760 C12orf76Q8N812 135 aaPredicted RBP27.46■■□□□ 1.99
HERC4-212ENST00000505760 SMG8Q8ND04 991 aaKnown RBP27.46■■□□□ 1.99
HERC4-212ENST00000505760 TMEM175Q9BSA9 504 aa27.46■■□□□ 1.99
HERC4-212ENST00000505760 VN1R3Q9BXE9 311 aa27.46■■□□□ 1.99
HERC4-212ENST00000505760 WNT7AO00755 349 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 SSBP05455 408 aaKnown RBP eCLIP27.45■■□□□ 1.98
HERC4-212ENST00000505760 POU5F1BQ06416 359 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 PTPN14Q15678 1187 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 PPFIBP1Q86W92 1011 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 CCDC51Q96ER9 411 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 CPB2Q96IY4 423 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 IPPQ9Y573 584 aa27.45■■□□□ 1.98
HERC4-212ENST00000505760 ZDBF2Q9HCK1 2354 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 MYO10Q9HD67 2058 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 WEE2P0C1S8 567 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 NHLH1Q02575 133 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 CAPSQ13938 189 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 SAFBQ15424 915 aaKnown RBP eCLIP27.44■■□□□ 1.98
HERC4-212ENST00000505760 CABP7Q86V35 215 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 ASAP3Q8TDY4 903 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 PIGOQ8TEQ8 1089 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 SLC22A17Q8WUG5 538 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 MTMR9Q96QG7 549 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 EMILIN2Q9BXX0 1053 aa27.44■■□□□ 1.98
HERC4-212ENST00000505760 EIF2AQ9BY44 585 aaKnown RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms