RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TMEM8AQ9HCN3 771 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 XPNPEP1Q9NQW7 623 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 PNMA3Q9UL41 463 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 COQ4Q9Y3A0 265 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 GRID2IPA4D2P6 1211 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 TMEM150BA6NC51 233 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 PIGRP01833 764 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 KLRC1P26715 233 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 MAP9Q49MG5 647 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 KRT39Q6A163 491 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 SLFN12LQ6IEE8 588 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 MMGT1Q8N4V1 131 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 PORCNQ9H237 461 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 ZC3H11AO75152 810 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 FARP2O94887 1054 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 STRN3Q13033 797 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 TTLL12Q14166 644 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 GPD1LQ8N335 351 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 SLC30A5Q8TAD4 765 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 SEPT1Q8WYJ6 367 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 ZNF446Q9NWS9 450 aa18.74■□□□□ 0.59
TRAPPC11-204ENST00000505676 SOWAHBA6NEL2 793 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 CNMDO75829 334 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 SEPT14Q6ZU15 432 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 ENOSF1Q7L5Y1 443 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 CREG2Q8IUH2 290 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 MMS19Q96T76 1030 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 STYXL1Q9Y6J8 313 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 HNRNPDLO14979 420 aaKnown RBP18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 ADSSP30520 456 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 SP2Q02086 613 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 PPP3CAQ08209 521 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 KCTD2Q14681 263 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 MTERF2Q49AM1 385 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 CFAP221Q4G0U5 840 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 MEI1Q5TIA1 1274 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 PNMA8AQ86V59 439 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 MORC4Q8TE76 937 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 PARD3BQ8TEW8 1205 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 BSNDQ8WZ55 320 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 POMGNT1Q8WZA1 660 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 SYT11Q9BT88 431 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 TLR10Q9BXR5 811 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 TMEM134Q9H6X4 195 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 SLC45A1Q9Y2W3 748 aa18.73■□□□□ 0.59
TRAPPC11-204ENST00000505676 SCN4AP35499 1836 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 PALMO75781 387 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 LDHAP00338 332 aaKnown RBP18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 TMEM253P0C7T8 217 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 PNMA6AP0CW24 399 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 SLC26A2P50443 739 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 GPC3P51654 580 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 MFAP3P55082 362 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 SNAPC2Q13487 334 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 C1orf220Q5T0J3 134 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 JPH2Q9BR39 696 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 GPR88Q9GZN0 384 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 TMEM117Q9H0C3 514 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 SALL4Q9UJQ4 1053 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 AJAP1Q9UKB5 411 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 LRRC37A2A6NM11 1700 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 DDX3XO00571 662 aaKnown RBP eCLIP18.72■□□□□ 0.594e-6■■■□□ 16.3
TRAPPC11-204ENST00000505676 YBX3P16989 372 aaKnown RBP eCLIP18.72■□□□□ 0.594e-6■■■□□ 15.7
TRAPPC11-204ENST00000505676 ARL2P36404 184 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 GLE1Q53GS7 698 aaKnown RBP18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 LDLRAD1Q5T700 205 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 PHLDB3Q6NSJ2 640 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 SH2D3AQ9BRG2 576 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 PAGR1Q9BTK6 254 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 AZI2Q9H6S1 392 aa18.72■□□□□ 0.59
TRAPPC11-204ENST00000505676 NCANO14594 1321 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 MYH9P35579 1960 aaKnown RBP18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 ZNF233A6NK53 670 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 ANKRD63C9JTQ0 380 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 BUB1O43683 1085 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 EXTL3O43909 919 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 TNFAIP3P21580 790 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 GCLMP48507 274 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 STAT5BP51692 787 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 SP4Q02446 784 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 CYP24A1Q07973 514 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 TARBP2Q15633 366 aaKnown RBP18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 ENOX2Q16206 610 aaKnown RBP18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 GJB7Q6PEY0 223 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 DEPTORQ8TB45 409 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 TAF4BQ92750 862 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 BICD1Q96G01 975 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 MMP19Q99542 508 aa18.71■□□□□ 0.59
TRAPPC11-204ENST00000505676 GSTTP1A0A1W2PQM5 241 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 GLTPD2A6NH11 291 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 SRGAP2O75044 1071 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 ADRB2P07550 413 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 LIG4P49917 911 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 DLG4P78352 724 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms