RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 JAG1P78504 1218 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 TCP10Q12799 353 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 LRRC14Q15048 493 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 SIX1Q15475 284 aaPredicted RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CNGA2Q16280 664 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC137Q6PK04 289 aaKnown RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 RPAINQ86UA6 219 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 EXOC3L1Q86VI1 746 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 ZSWIM2Q8NEG5 633 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 MKL1Q969V6 931 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 ZSWIM1Q9BR11 485 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 DDX23Q9BUQ8 820 aaKnown RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.364e-6■■■■■ 111.8
UBE3D-206ENST00000505226 DDTLA6NHG4 134 aaPredicted RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 VIMP08670 466 aaKnown RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 ITIH4Q14624 930 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 SLC15A2Q16348 729 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 ZNF568Q3ZCX4 644 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 TBC1D1Q86TI0 1168 aaPredicted RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 COL23A1Q86Y22 540 aaPredicted RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 AMNQ9BXJ7 453 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC134Q9H6E4 229 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CTTNBP2NLQ9P2B4 639 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 BAIAP2L1Q9UHR4 511 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CNOT7Q9UIV1 285 aaKnown RBP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 TAF1LQ8IZX4 1826 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
UBE3D-206ENST00000505226 AGTP01019 485 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 MYL7Q01449 175 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 MESDQ14696 234 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 NFIL3Q16649 462 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 TRPM8Q7Z2W7 1104 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 AAASQ9NRG9 546 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 SUFUQ9UMX1 484 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 CD2APQ9Y5K6 639 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 F5H6K3 240 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
UBE3D-206ENST00000505226 GAP43P17677 238 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 CHRNA3P32297 505 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 NF2P35240 595 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 KCNJ2P63252 427 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 LONRF1Q17RB8 773 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 C6orf118Q5T5N4 469 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 SH3BP5LQ7L8J4 393 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 DCAF4Q8WV16 495 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 CD101Q93033 1021 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 MKNK1Q9BUB5 465 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 UBE2TQ9NPD8 197 aaPredicted RBP12.81□□□□□ -0.36
UBE3D-206ENST00000505226 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.81□□□□□ -0.36
UBE3D-206ENST00000505226 L3MBTL1Q9Y468 752 aa12.81□□□□□ -0.36
UBE3D-206ENST00000505226 CLTAP09496 248 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RARAP10276 462 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 MMP14P50281 582 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 HADHBP55084 474 aaKnown RBP12.8□□□□□ -0.36
UBE3D-206ENST00000505226 PPP3CAQ08209 521 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 TAX1BP1Q86VP1 789 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 FBXO11Q86XK2 927 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC50Q8IVM0 306 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 ANKS4BQ8N8V4 417 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 ART4Q93070 314 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 STAMBPL1Q96FJ0 436 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 TMEM109Q9BVC6 243 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC113Q9H0I3 377 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 DONSONQ9NYP3 566 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 LTBP1Q14766 1721 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 AFF2P51816 1311 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 UBOX5O94941 541 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 OAS1P00973 400 aaKnown RBP12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RPSAP08865 295 aaKnown RBP12.8□□□□□ -0.36
UBE3D-206ENST00000505226 CHRNB2P17787 502 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 UBXN2AP68543 259 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 BFSP1Q12934 665 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 C11orf63Q6NUN7 778 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
UBE3D-206ENST00000505226 MLXIPLQ9NP71 852 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 PFASO15067 1338 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 SYNGAP1Q96PV0 1343 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 SNX3O60493 162 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 BBOX1O75936 387 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 SGPL1O95470 568 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 SERPINB2P05120 415 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 ZNF131P52739 623 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 ADCY2Q08462 1091 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 MPP2Q14168 576 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 C1orf220Q5T0J3 134 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 PNMA8AQ86V59 439 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms