RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TTC37Q6PGP7 1564 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 RASSF10A6NK89 507 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 GOLGA6L22H0YM25 854 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 SHOXO15266 292 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 TBX1O43435 398 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 FKBP9O95302 570 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 CPP00450 1065 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 CFBP00751 764 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 SCG5P05408 212 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 PF4V1P10720 104 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 ITGA4P13612 1032 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 CD247P20963 164 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 FBLP22087 321 aaKnown RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 BDNFP23560 247 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 MAN1A1P33908 653 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 ADCYAP1R1P41586 468 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 NEK3P51956 506 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 HNRNPMP52272 730 aaKnown RBP eCLIP4.92□□□□□ -1.62
RFC1-208ENST00000504849 GFRA1P56159 465 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 IL2P60568 153 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 ERVK-21P61565 698 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 DSG1Q02413 1049 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 FOXD4Q12950 439 aaPredicted RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 KLF1Q13351 362 aaPredicted RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 PRKD1Q15139 912 aaPredicted RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 ABCB5Q2M3G0 1257 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 NRN1LQ496H8 165 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 GPR158Q5T848 1215 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 STYK1Q6J9G0 422 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 ARHGEF18Q6ZSZ5 1173 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 FKBP9P1Q75LS8 142 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 C11orf74Q86VG3 221 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 WDR63Q8IWG1 891 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 SMC1BQ8NDV3 1235 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 DCAF4Q8WV16 495 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 GJA10Q969M2 543 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 TIFAQ96CG3 184 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 CFAP53Q96M91 514 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 CHMP4BQ9H444 224 aaKnown RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 PPCSQ9HAB8 311 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 PTPRHQ9HD43 1115 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 RRAGDQ9NQL2 400 aaPredicted RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 DDX21Q9NR30 783 aaKnown RBP eCLIP4.92□□□□□ -1.62
RFC1-208ENST00000504849 FAM86C1Q9NVL1 165 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 PUF60Q9UHX1 559 aaKnown RBP4.92□□□□□ -1.62
RFC1-208ENST00000504849 DAAM1Q9Y4D1 1078 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 PLA2R1Q13018 1463 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 USP19O94966 1318 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 ARHGAP5Q13017 1502 aa4.92□□□□□ -1.62
RFC1-208ENST00000504849 POLR3AO14802 1390 aaPredicted RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 SAMD9LQ8IVG5 1584 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 MADDQ8WXG6 1647 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 VIRMAQ69YN4 1812 aaKnown RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 M0R2C6 588 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 CBX4O00257 560 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 APAF1O14727 1248 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 GAS7O60861 476 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 PPP1R11O60927 126 aaPredicted RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 BCAR3O75815 825 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 CRTAMO95727 393 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 IGHDP01880 384 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 LTFP02788 710 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 MYL3P08590 195 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 MYBL2P10244 700 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 LPOP22079 712 aaPredicted RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 SESN3P58005 492 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 NTRK3Q16288 839 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 LSM12Q3MHD2 195 aaKnown RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 ATP13A4Q4VNC1 1196 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 USP39Q53GS9 565 aaKnown RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 WDR78Q5VTH9 848 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 DCAF15Q66K64 600 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 EPM2AIP1Q7L775 607 aaPredicted RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 AMOTL1Q8IY63 956 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 FTSJ3Q8IY81 847 aaKnown RBP4.91□□□□□ -1.62
RFC1-208ENST00000504849 C7orf61Q8IZ16 206 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 BTN2A2Q8WVV5 523 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 RUNDC1Q96C34 613 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 PTCHD1Q96NR3 888 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 ZFYVE21Q9BQ24 234 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 HERPUD2Q9BSE4 406 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 C22orf23Q9BZE7 217 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 SAMD15Q9P1V8 674 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 LZTS1Q9Y250 596 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 ZKSCAN5Q9Y2L8 839 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 ZNF451Q9Y4E5 1061 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 NLRP1Q9C000 1473 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 TRPM2O94759 1503 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 SYCP2Q9BX26 1530 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 STRCQ7RTU9 1775 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 KANK1Q14678 1352 aa4.91□□□□□ -1.62
RFC1-208ENST00000504849 KDM5AP29375 1690 aaKnown RBP4.9□□□□□ -1.62
RFC1-208ENST00000504849 IQGAP1P46940 1657 aa4.9□□□□□ -1.62
RFC1-208ENST00000504849 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 KLRG2A4D1S0 409 aaPredicted RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 H0Y8X5 98 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 FZD9O00144 591 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 FOXS1O43638 330 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 ZBTB7AO95365 584 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms