RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
DDR1-254ENST00000504679 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.03■□□□□ 0.8
DDR1-254ENST00000504679 SLC24A5Q71RS6 500 aa20.03■□□□□ 0.8
DDR1-254ENST00000504679 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
DDR1-254ENST00000504679 TMEM161BQ8NDZ6 487 aa20.03■□□□□ 0.8
DDR1-254ENST00000504679 MRPL44Q9H9J2 332 aaKnown RBP20.03■□□□□ 0.8
DDR1-254ENST00000504679 ADGRA3Q8IWK6 1321 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.02■□□□□ 0.8
DDR1-254ENST00000504679 FRMD3A2A2Y4 597 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 RBAK-RBAKDNI3L0D1 243 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 GTPBP6O43824 516 aaPredicted RBP20.02■□□□□ 0.8
DDR1-254ENST00000504679 MGEA5O60502 916 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 TSPAN1O60635 241 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 NR1I2O75469 434 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 HOXA11P31270 313 aaPredicted RBP20.02■□□□□ 0.8
DDR1-254ENST00000504679 TWF2Q6IBS0 349 aaKnown RBP20.02■□□□□ 0.8
DDR1-254ENST00000504679 NOTUMQ6P988 496 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 UNC13DQ70J99 1090 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 SFR1Q86XK3 245 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 SLC9A7Q96T83 725 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 CCDC113Q9H0I3 377 aa20.02■□□□□ 0.8
DDR1-254ENST00000504679 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 K7ENM7 598 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 KINO60870 393 aaKnown RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 SKIP12755 728 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 ATP2A2P16615 1042 aaKnown RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 ARF4P18085 180 aaPredicted RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 CASP1P29466 404 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 NMT1P30419 496 aaKnown RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 FAM189BP81408 668 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 AMHR2Q16671 573 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 ZNF720Q7Z2F6 126 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 MYOCDQ8IZQ8 938 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 TOP1MTQ969P6 601 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 CCDC47Q96A33 483 aaKnown RBP20.01■□□□□ 0.79
DDR1-254ENST00000504679 TRAIPQ9BWF2 469 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 OLFML3Q9NRN5 406 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 PCDHB7Q9Y5E2 793 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 PCDHB13Q9Y5F0 798 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 MICAL3Q7RTP6 2002 aa20.01■□□□□ 0.79
DDR1-254ENST00000504679 A0A0U1RQF3 1178 aa20■□□□□ 0.79
DDR1-254ENST00000504679 A0A1B0GUA9 196 aa20■□□□□ 0.79
DDR1-254ENST00000504679 UPP2O95045 317 aa20■□□□□ 0.79
DDR1-254ENST00000504679 STAG3L1P0CL83 205 aa20■□□□□ 0.79
DDR1-254ENST00000504679 SARSP49591 514 aaKnown RBP20■□□□□ 0.79
DDR1-254ENST00000504679 DEFB103AP81534 67 aa20■□□□□ 0.79
DDR1-254ENST00000504679 GTF2BQ00403 316 aa20■□□□□ 0.79
DDR1-254ENST00000504679 COASYQ13057 564 aa20■□□□□ 0.79
DDR1-254ENST00000504679 ELOA2Q8IYF1 753 aaPredicted RBP20■□□□□ 0.79
DDR1-254ENST00000504679 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
DDR1-254ENST00000504679 KCNN1Q92952 543 aa20■□□□□ 0.79
DDR1-254ENST00000504679 CCDC51Q96ER9 411 aa20■□□□□ 0.79
DDR1-254ENST00000504679 CPB2Q96IY4 423 aa20■□□□□ 0.79
DDR1-254ENST00000504679 ZBED2Q9BTP6 218 aa20■□□□□ 0.79
DDR1-254ENST00000504679 MRPL4Q9BYD3 311 aaKnown RBP20■□□□□ 0.79
DDR1-254ENST00000504679 ST6GALNAC4Q9H4F1 302 aa20■□□□□ 0.79
DDR1-254ENST00000504679 LMBRD1Q9NUN5 540 aa20■□□□□ 0.79
DDR1-254ENST00000504679 TBC1D7Q9P0N9 293 aa20■□□□□ 0.79
DDR1-254ENST00000504679 LRFN2Q9ULH4 789 aa20■□□□□ 0.79
DDR1-254ENST00000504679 TBX20Q9UMR3 447 aa20■□□□□ 0.79
DDR1-254ENST00000504679 C9IYK1 514 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 B4GALT5O43286 388 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 PSMD2Q13200 908 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 POSTNQ15063 836 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 STXBP4Q6ZWJ1 553 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 FIZ1Q96SL8 496 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 ELAC1Q9H777 363 aaKnown RBP19.99■□□□□ 0.79
DDR1-254ENST00000504679 CNTNAP2Q9UHC6 1331 aa19.99■□□□□ 0.79
DDR1-254ENST00000504679 N4BP3O15049 544 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 GCNT3O95395 438 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 EOMESO95936 686 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 RPN1P04843 607 aaKnown RBP19.98■□□□□ 0.79
DDR1-254ENST00000504679 IBSPP21815 317 aaPredicted RBP19.98■□□□□ 0.79
DDR1-254ENST00000504679 RAB27AP51159 221 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 DPYDQ12882 1025 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 ALCAMQ13740 583 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 NT5DC1Q5TFE4 455 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 SLC27A1Q6PCB7 646 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 TAS1R3Q7RTX0 852 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 APBB1IPQ7Z5R6 666 aaPredicted RBP19.98■□□□□ 0.79
DDR1-254ENST00000504679 HERC6Q8IVU3 1022 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 HVCN1Q96D96 273 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 ACO2Q99798 780 aaKnown RBP19.98■□□□□ 0.79
DDR1-254ENST00000504679 ADPGKQ9BRR6 497 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 TRIM6Q9C030 488 aaPredicted RBP19.98■□□□□ 0.79
DDR1-254ENST00000504679 FAM105AQ9NUU6 356 aa19.98■□□□□ 0.79
DDR1-254ENST00000504679 TTC3P53804 2025 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 ZNF623O75123 536 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 SMC2O95347 1197 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 LRIT3Q3SXY7 679 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 KMT5BQ4FZB7 885 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 ZC2HC1CQ53FD0 456 aaPredicted RBP19.97■□□□□ 0.79
DDR1-254ENST00000504679 ATF7IP2Q5U623 682 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 ECHDC2Q86YB7 292 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 NPAS4Q8IUM7 802 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 PGBD4Q96DM1 585 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 BICD1Q96G01 975 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 TCHPQ9BT92 498 aa19.97■□□□□ 0.79
DDR1-254ENST00000504679 TARS2Q9BW92 718 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms