RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SNHG28P0DPA3 235 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 HSPD1P10809 573 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 EPCAMP16422 314 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 ATF7P17544 494 aaPredicted RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 NCLP19338 710 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 TCF7P36402 384 aaPredicted RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 NOVP48745 357 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 METAP2P50579 478 aaKnown RBP eCLIP4.19□□□□□ -1.74
USP46-205ENST00000504078 HSD17B4P51659 736 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 SMTNP53814 917 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 GDF10P55107 478 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 RAC1P63000 192 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 MRPS9P82933 396 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 NMIQ13287 307 aaPredicted RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 ST3GAL2Q16842 350 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 SLC35G1Q2M3R5 365 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 FAM26DQ5JW98 314 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 FAM102BQ5T8I3 360 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 TRMT1LQ7Z2T5 733 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 RTN4RL1Q86UN2 441 aaPredicted RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 CCDC105Q8IYK2 499 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 ATP8B4Q8TF62 1192 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 RSAD2Q8WXG1 361 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 P2RX5Q93086 422 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 IWS1Q96ST2 819 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 IRF2BPLQ9H1B7 796 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 S1PR5Q9H228 398 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 TMX1Q9H3N1 280 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 KAT14Q9H8E8 782 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 EHMT1Q9H9B1 1298 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 JMJD4Q9H9V9 463 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 NEUROD4Q9HD90 331 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 DBR1Q9UK59 544 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 MRPL11Q9Y3B7 192 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 TRPV2Q9Y5S1 764 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 HCFC2Q9Y5Z7 792 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 ZFHX2Q9C0A1 2572 aaPredicted RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 C2orf16Q68DN1 1984 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 TTC3P53804 2025 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 NT5C1B-RDH14C9J2C7 533 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 DDX39AO00148 427 aaKnown RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 FSCN2O14926 492 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 LILRB5O75023 590 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 CAND2O75155 1236 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PPFIA4O75335 1185 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 STAU1O95793 577 aaKnown RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 LMNAP02545 664 aaKnown RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 FGAP02671 866 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 SSBP05455 408 aaKnown RBP eCLIP4.18□□□□□ -1.74
USP46-205ENST00000504078 PARP1P09874 1014 aaKnown RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 SRGAP2BP0DMP2 458 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 GNAT1P11488 350 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 NPR3P17342 541 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 ADAM17P78536 824 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 COL9A2Q14055 689 aaPredicted RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 UBE2SQ16763 222 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 LONRF3Q496Y0 759 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 ASPRV1Q53RT3 343 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 MARCH8Q5T0T0 291 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 GPATCH4Q5T3I0 446 aaKnown RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 METTL7BQ6UX53 244 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 TMC5Q6UXY8 1006 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 C20orf204Q6ZNR8 217 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 TMEM173Q86WV6 379 aaPredicted RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 MCF2L2Q86YR7 1114 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 RAB11FIP4Q86YS3 637 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 ENAHQ8N8S7 591 aaPredicted RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 DTWD2Q8NBA8 298 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 TMEM40Q8WWA1 233 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 GLG1Q92896 1179 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PGBD1Q96JS3 809 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PIGSQ96S52 555 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 OSMRQ99650 979 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 FOXQ1Q9C009 403 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PRM3Q9NNZ6 103 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 TYW1Q9NV66 732 aaKnown RBP4.18□□□□□ -1.74
USP46-205ENST00000504078 ANAPC4Q9UJX5 808 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PADI3Q9ULW8 664 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 DDX19BQ9UMR2 479 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 NR2E1Q9Y466 385 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PCDHB12Q9Y5F1 795 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 PCDHA1Q9Y5I3 950 aa4.18□□□□□ -1.74
USP46-205ENST00000504078 DENND3A2RUS2 1198 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 GCOM1H8Y6P7 765 aaPredicted RBP4.17□□□□□ -1.74
USP46-205ENST00000504078 M0QZ92 97 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 FIBPO43427 364 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 ATP9AO75110 1047 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 CLASP2O75122 1294 aaKnown RBP4.17□□□□□ -1.74
USP46-205ENST00000504078 VTNP04004 478 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 POLR2MP0CAP2 368 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 STAG3L1P0CL83 205 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 LAG3P18627 525 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 AOC1P19801 751 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 MX1P20591 662 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 FGFR4P22455 802 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 CD97P48960 835 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 SARSP49591 514 aaKnown RBP4.17□□□□□ -1.74
USP46-205ENST00000504078 KCNC3Q14003 757 aa4.17□□□□□ -1.74
USP46-205ENST00000504078 PUM1Q14671 1186 aaKnown RBP eCLIP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms