RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 HDLBPQ00341 1268 aaKnown RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 CRLF3Q8IUI8 442 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 EYA4O95677 639 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 CALB1P05937 261 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 BEND6Q5SZJ8 279 aaPredicted RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 DEFB132Q7Z7B7 95 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 INTS2Q9H0H0 1204 aaKnown RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 ZNF70Q9UC06 446 aaPredicted RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 CNOT7Q9UIV1 285 aaKnown RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 PCDHA10Q9Y5I2 948 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 TBX3O15119 743 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 SLC16A4O15374 487 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 FCER1AP12319 257 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 VAMP7P51809 220 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 VSNL1P62760 191 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 ANKRD40Q6AI12 368 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 KCNV1Q6PIU1 500 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 NLRP14Q86W24 1093 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 N4BP2L2Q92802 583 aaPredicted RBP17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 FAM49AQ9H0Q0 323 aaPredicted RBP17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 TMEM60Q9H2L4 133 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 CHGBP05060 677 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 SWSAP1Q6NVH7 229 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 EPM2AIP1Q7L775 607 aaPredicted RBP17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 SIX6OS1Q8N1H7 587 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 RFFLQ8WZ73 363 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 FAF2Q96CS3 445 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 DRC3Q9H069 523 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 COPEO14579 308 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 COG2Q14746 738 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 SPOPLQ6IQ16 392 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 DCLK2Q8N568 766 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 VIPAS39Q9H9C1 493 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 NOC2LQ9Y3T9 749 aaKnown RBP17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 GGPS1O95749 300 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 KLHL38Q2WGJ6 581 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 WDR75Q8IWA0 830 aaKnown RBP17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 NUDCD1Q96RS6 583 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 HEMGNQ9BXL5 484 aa17.24■□□□□ 0.35
HMGXB3-202ENST00000503427 CTIFO43310 598 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 ESRRGP62508 458 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 MMP19Q99542 508 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 NUP85Q9BW27 656 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 TRIM9Q9C026 710 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 STRIP2Q9ULQ0 834 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 KRT38O76015 456 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 DPYDQ12882 1025 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 PACSIN2Q9UNF0 486 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 SLIT1O75093 1534 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 KIF20BQ96Q89 1820 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 NCF2P19878 526 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 HMGCS2P54868 508 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.354e-6■■■■□ 22.5
HMGXB3-202ENST00000503427 ART3Q13508 389 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 TKFCQ3LXA3 575 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 SRRM1Q8IYB3 904 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 HSPH1Q92598 858 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 SLC12A6Q9UHW9 1150 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 ASB14A6NK59 587 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 MGEA5O60502 916 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 DHX34Q14147 1143 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 NR1I3Q14994 352 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 ICE2Q659A1 982 aa17.23■□□□□ 0.35
HMGXB3-202ENST00000503427 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 TMPRSS15P98073 1019 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 TEX13BQ9BXU2 312 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 NGRNQ9NPE2 291 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 A0A0G2JND7 137 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 PDHBP11177 359 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 TTC17Q96AE7 1141 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 SPECC1L-ADORA2AF8WAN1 911 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 SRGNP10124 158 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 RNF168Q8IYW5 571 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 TYW5A2RUC4 315 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 MYBL1P10243 752 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 TRAIPQ9BWF2 469 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 FAM96AQ9H5X1 160 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 ANGPTL3Q9Y5C1 460 aa17.22■□□□□ 0.35
HMGXB3-202ENST00000503427 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 SOX5P35711 763 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 MTMR2Q13614 643 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms