RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 BFSP2Q13515 415 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 LPIN1Q14693 890 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TTC29Q8NA56 475 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 RIN2Q8WYP3 895 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 C2orf49Q9BVC5 232 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CHN2P52757 468 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 STK11Q15831 433 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 MND1Q9BWT6 205 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 RTEL1Q9NZ71 1219 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ZC3H7BQ9UGR2 993 aaKnown RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SEC16AO15027 2179 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 BDNFP23560 247 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 HIC1Q14526 733 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TAF8Q7Z7C8 310 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 EXOC3L1Q86VI1 746 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SPIRE2Q8WWL2 714 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 PRDM11Q9NQV5 511 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 GGT7Q9UJ14 662 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SNX6Q9UNH7 406 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 DTNAQ9Y4J8 743 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 A0A087WXM4 84 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 USP27XA6NNY8 438 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 FBLN1P23142 703 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ABATP80404 500 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TTLL12Q14166 644 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 DHX32Q7L7V1 743 aaKnown RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 PACSIN1Q9BY11 444 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SLC7A5P2Q9GIP4 190 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CECR2Q9BXF3 1484 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 GSTA4O15217 222 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 GNPATO15228 680 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TSGA10IPQ3SY00 556 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 WDR24Q96S15 920 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 EHD1Q9H4M9 534 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 GPBP1L1Q9HC44 474 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CPSF3Q9UKF6 684 aaKnown RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ATF2P15336 505 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SFNP31947 248 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 MAN1A1P33908 653 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 THOP1P52888 689 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 NFE2L1Q14494 772 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 KNOP1Q1ED39 458 aaKnown RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 Q6ZUG5 572 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SLC43A3Q8NBI5 491 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 BBS2Q9BXC9 721 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ANKFY1Q9P2R3 1169 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 V9GYQ6 96 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 MAP3K1Q13233 1512 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 H7C1D1 291 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TWISTNBQ3B726 338 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ELMOD2Q8IZ81 293 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ERP27Q96DN0 273 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 KLC2Q9H0B6 622 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 FANCFQ9NPI8 374 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CLRN2A0PK11 232 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TRIM23P36406 574 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 NR1H2P55055 460 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 RBM44Q6ZP01 1051 aaKnown RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CENPOQ9BU64 300 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 PSTPIP1O43586 416 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CCDC130P13994 396 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TRIP13Q15645 432 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ORC4O43929 436 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ACSL4O60488 711 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ASMTLO95671 621 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 C5orf22Q49AR2 442 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 ARHGEF19Q8IW93 802 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 MDM1Q8TC05 714 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 USP13Q92995 863 aaPredicted RBP5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SFMBT1Q9UHJ3 866 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 SPTLC1O15269 473 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 GABBR2O75899 941 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 AKAP5P24588 427 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CCNG2Q16589 344 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 C19orf18Q8NEA5 215 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 CMTM5Q96DZ9 223 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 TSPYL4Q9UJ04 414 aa5.06□□□□□ -1.6
NEAT1-202ENST00000501122 RASSF7Q02833 373 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 KRT24Q2M2I5 525 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF879B4DU55 563 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 PSMC3P17980 439 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 EXOSC10Q01780 885 aaKnown RBP5.05□□□□□ -1.6
NEAT1-202ENST00000501122 EFTUD2Q15029 972 aaKnown RBP eCLIP5.05□□□□□ -1.6
NEAT1-202ENST00000501122 TESK2Q96S53 571 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 NCAPD3P42695 1498 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 SOWAHDA6NJG2 315 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 SAC3D1A6NKF1 404 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 NPTX2P47972 431 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 MAPK11Q15759 364 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 SPARTQ8N0X7 666 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 UBASH3BQ8TF42 649 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 EDARQ9UNE0 448 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 PCDHGA10Q9Y5H3 936 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 H3BQF6 201 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 HSPA6P17066 643 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 CCDC177Q9NQR7 707 aaPredicted RBP5.05□□□□□ -1.6
NEAT1-202ENST00000501122 COMMD8Q9NX08 183 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 ANKRD30BQ9BXX2 1392 aa5.05□□□□□ -1.6
NEAT1-202ENST00000501122 PARNO95453 639 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms