RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 LILRA3Q8N6C8 439 aaPredicted RBP3.62□□□□□ -1.83
RBM39-242ENST00000498280 ZSWIM2Q8NEG5 633 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 NELL1Q92832 810 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 E2F7Q96AV8 911 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 PITHD1Q9GZP4 211 aaPredicted RBP3.62□□□□□ -1.83
RBM39-242ENST00000498280 OSBPL2Q9H1P3 480 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 PIF1Q9H611 641 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 ZSWIM4Q9H7M6 989 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 ACSS2Q9NR19 701 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 COX11Q9Y6N1 276 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 LEFTY2O00292 366 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 ELL2O00472 640 aaPredicted RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 KIAA0355O15063 1070 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 OPHN1O60890 802 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 APOBEC3AP31941 199 aaPredicted RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 ZEB1P37275 1124 aaPredicted RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 PTH2RP49190 550 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 USP14P54578 494 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 TAP1Q03518 808 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 ADCY2Q08462 1091 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 EPHA7Q15375 998 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 ARHGAP44Q17R89 818 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 TIGD2Q4W5G0 525 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 PLEKHG4Q58EX7 1191 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 PIK3R6Q5UE93 754 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 DDX53Q86TM3 631 aaKnown RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 CPPED1Q9BRF8 314 aaPredicted RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 MS4A5Q9H3V2 200 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 PCIF1Q9H4Z3 704 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 C14orf93Q9H972 538 aaKnown RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.61□□□□□ -1.83
RBM39-242ENST00000498280 CDK11AQ9UQ88 783 aaPredicted RBP3.61□□□□□ -1.83
RBM39-242ENST00000498280 SPATA31A6Q5VVP1 1343 aa3.61□□□□□ -1.83
RBM39-242ENST00000498280 LOC105371045A0A1W2PR82 267 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 PROB1E7EW31 1015 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 CBX4O00257 560 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 PLD2O14939 933 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 PPP1R12AO14974 1030 aaPredicted RBP3.6□□□□□ -1.83
RBM39-242ENST00000498280 DAPK3O43293 454 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 RECQL4O94761 1208 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 PCDH8O95206 1070 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 CYP17A1P05093 508 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 GYPEP15421 78 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 GNAT2P19087 354 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 PLA2G5P39877 138 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 AVPR1BP47901 424 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 BCAR1P56945 870 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 SQSTM1Q13501 440 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 ERCC6LQ2NKX8 1250 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 C2orf27AQ580R0 203 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 DCAF17Q5H9S7 520 aaPredicted RBP3.6□□□□□ -1.83
RBM39-242ENST00000498280 Q6YL49 198 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 SYT12Q8IV01 421 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 MSL3Q8N5Y2 521 aaKnown RBP3.6□□□□□ -1.83
RBM39-242ENST00000498280 SUPT20HQ8NEM7 779 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 OR52N2Q8NGI0 321 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 FAM193BQ96PV7 902 aaPredicted RBP3.6□□□□□ -1.83
RBM39-242ENST00000498280 FDXACB1Q9BRP7 624 aaPredicted RBP3.6□□□□□ -1.83
RBM39-242ENST00000498280 NOL10Q9BSC4 688 aaKnown RBP3.6□□□□□ -1.83
RBM39-242ENST00000498280 WDR11Q9BZH6 1224 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 KCNH6Q9H252 994 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 R3HDMLQ9H3Y0 253 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 ZMAT4Q9H898 229 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 B4GALT6Q9UBX8 382 aa3.6□□□□□ -1.83
RBM39-242ENST00000498280 H7C1D1 291 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 TRIM24O15164 1050 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 OPA1O60313 960 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 NCR1O76036 304 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 ALDH1A2O94788 518 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 JMJD7P0C870 316 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 ATP2A2P16615 1042 aaKnown RBP3.59□□□□□ -1.83
RBM39-242ENST00000498280 IGFALSP35858 605 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 ZBTB41Q5SVQ8 909 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 CDCA2Q69YH5 1023 aaPredicted RBP3.59□□□□□ -1.83
RBM39-242ENST00000498280 APBB1IPQ7Z5R6 666 aaPredicted RBP3.59□□□□□ -1.83
RBM39-242ENST00000498280 PPP1R14CQ8TAE6 165 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 MKL1Q969V6 931 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 ZNF496Q96IT1 587 aaPredicted RBP3.59□□□□□ -1.83
RBM39-242ENST00000498280 UIMC1Q96RL1 719 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 TOMM22Q9NS69 142 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 INTS7Q9NVH2 962 aaKnown RBP3.59□□□□□ -1.83
RBM39-242ENST00000498280 OXSMQ9NWU1 459 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 TRPM5Q9NZQ8 1165 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 EIF2B4Q9UI10 523 aaKnown RBP3.59□□□□□ -1.83
RBM39-242ENST00000498280 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.59□□□□□ -1.83
RBM39-242ENST00000498280 INSL6Q9Y581 213 aa3.59□□□□□ -1.83
RBM39-242ENST00000498280 FAM83GA6ND36 823 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 ZNF185O15231 689 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 DNAJC6O75061 913 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 LY86O95711 162 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 C1RP00736 705 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 LAG3P18627 525 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 CTGFP29279 349 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 FOXI1Q12951 378 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 ZNF174Q15697 407 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 VPS72Q15906 364 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 NFE2L2Q16236 605 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 ANKS6Q68DC2 871 aa3.58□□□□□ -1.84
RBM39-242ENST00000498280 KIAA1841Q6NSI8 718 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms