RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SUSD6Q92537 303 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 CASP10Q92851 521 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 CCDC43Q96MW1 224 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 MTRQ99707 1265 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 TBC1D13Q9NVG8 400 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 C2orf71A6NGG8 1288 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 BTBD18B2RXH4 712 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 NEMFO60524 1076 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 OFD1O75665 1012 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 ERLIN2O94905 339 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 LARGE1O95461 756 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 CXCL14O95715 111 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 TFDP1Q14186 410 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 PCBP1Q15365 356 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 DDX53Q86TM3 631 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 RNF149Q8NC42 400 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 EDAQ92838 391 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 FAM193BQ96PV7 902 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 NRDE2Q9H7Z3 1164 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 KANSL3Q9P2N6 904 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 CNTNAP2Q9UHC6 1331 aa13.11□□□□□ -0.31
NUDCD3-211ENST00000497978 SLITRK3O94933 977 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 TXKP42681 527 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 FOSBP53539 338 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 SAFBQ15424 915 aaKnown RBP eCLIP13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 APOL5Q9BWW9 433 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
NUDCD3-211ENST00000497978 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 ZBTB39O15060 712 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 JAK2O60674 1132 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 CLASP2O75122 1294 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 DGAT1O75907 488 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 LYPLA2O95372 231 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 GALTP07902 379 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 CTSAP10619 480 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 AXLP30530 894 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 HOXA11P31270 313 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 ITIH3Q06033 890 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 POTEHQ6S545 545 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 AGMOQ6ZNB7 445 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 HFE2Q6ZVN8 426 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 NECTIN4Q96NY8 510 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 HSD17B14Q9BPX1 270 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 NR2E1Q9Y466 385 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
NUDCD3-211ENST00000497978 INO80B-WBP1J3KQ70 363 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 ALDH2P05091 517 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 ITGA4P13612 1032 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 SLC11A1P49279 550 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 PTENP60484 403 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 ZXDAP98168 799 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 UBXN11Q5T124 520 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 TRIM67Q6ZTA4 783 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 TMEM173Q86WV6 379 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 CCDC51Q96ER9 411 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 ADAM7Q9H2U9 754 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 DZANK1Q9NVP4 752 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 DNAJB4Q9UDY4 337 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 IRAK3Q9Y616 596 aa13.08□□□□□ -0.32
NUDCD3-211ENST00000497978 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms