RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 NPAS4Q8IUM7 802 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 TMEM161BQ8NDZ6 487 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 CPB2Q96IY4 423 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 FIZ1Q96SL8 496 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 TRIM9Q9C026 710 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 LRRC27Q9C0I9 530 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 TMEM134Q9H6X4 195 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 USP25Q9UHP3 1055 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 YBX2Q9Y2T7 364 aaKnown RBP17.87■□□□□ 0.45
FAM3A-220ENST00000497506 COL4A6Q14031 1691 aa17.87■□□□□ 0.45
FAM3A-220ENST00000497506 FRMD3A2A2Y4 597 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 GOLGA6L4A6NEF3 574 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 TRAK2O60296 914 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 MAPTP10636 758 aaKnown RBP17.86■□□□□ 0.45
FAM3A-220ENST00000497506 MYOGP15173 224 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 LIG1P18858 919 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 FXR1P51114 621 aaKnown RBP eCLIP17.86■□□□□ 0.45
FAM3A-220ENST00000497506 AMPD3Q01432 767 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 NCBP1Q09161 790 aaKnown RBP17.86■□□□□ 0.45
FAM3A-220ENST00000497506 RAB30Q15771 203 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 ECHDC2Q86YB7 292 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 CEP57L1Q8IYX8 460 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 TMEM87AQ8NBN3 555 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 KCNN1Q92952 543 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 RAD9AQ99638 391 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 C7orf25Q9BPX7 421 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 ZBED2Q9BTP6 218 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 ZHX3Q9H4I2 956 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 ELAC1Q9H777 363 aaKnown RBP17.86■□□□□ 0.45
FAM3A-220ENST00000497506 RC3H2Q9HBD1 1191 aaKnown RBP17.86■□□□□ 0.45
FAM3A-220ENST00000497506 USP20Q9Y2K6 914 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 PHLPP2Q6ZVD8 1323 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 CNTNAP2Q9UHC6 1331 aa17.86■□□□□ 0.45
FAM3A-220ENST00000497506 A0A1B0GUA9 196 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 TLL1O43897 1013 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 ZNF623O75123 536 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 GADD45BO75293 160 aaPredicted RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 DGKIO75912 1065 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 STAG3L1P0CL83 205 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 ATF7P17544 494 aaPredicted RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 GAP43P17677 238 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 IBSPP21815 317 aaPredicted RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 DNAJB2P25686 324 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 AFMP43652 599 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 PRPF4BQ13523 1007 aaKnown RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 NT5DC1Q5TFE4 455 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 NOTUMQ6P988 496 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 CLEC17AQ6ZS10 378 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 HAUS6Q7Z4H7 955 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 ZNF598Q86UK7 904 aaKnown RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 SFR1Q86XK3 245 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 GRAMD1CQ8IYS0 662 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 ZNF689Q96CS4 500 aaPredicted RBP17.85■□□□□ 0.45
FAM3A-220ENST00000497506 CCDC51Q96ER9 411 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 PAGE5Q96GU1 130 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 TMEM161AQ9NX61 479 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 MSRAQ9UJ68 235 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 INSL6Q9Y581 213 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
FAM3A-220ENST00000497506 FNDC1Q4ZHG4 1894 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-220ENST00000497506 CHD9Q3L8U1 2897 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 LCHNA4D1U4 455 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 ZNF202O95125 648 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 IDEP14735 1019 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 CASP1P29466 404 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 NMT1P30419 496 aaKnown RBP17.84■□□□□ 0.45
FAM3A-220ENST00000497506 CDR2LQ86X02 465 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-220ENST00000497506 FAM178BQ8IXR5 827 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 ENGASEQ8NFI3 743 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-220ENST00000497506 EIF2AQ9BY44 585 aaKnown RBP17.84■□□□□ 0.45
FAM3A-220ENST00000497506 BLZF1Q9H2G9 400 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 NKX2-4Q9H2Z4 354 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 RNF19AQ9NV58 838 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-220ENST00000497506 SEL1LQ9UBV2 794 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 LRFN2Q9ULH4 789 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 PCDHB2Q9Y5E7 798 aa17.84■□□□□ 0.45
FAM3A-220ENST00000497506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-220ENST00000497506 H0YCG3 227 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 ARHGEF15O94989 841 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 EOMESO95936 686 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 SCP2P22307 547 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 GATMP50440 423 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 RAB27AP51159 221 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 SNW1Q13573 536 aaKnown RBP17.83■□□□□ 0.44
FAM3A-220ENST00000497506 CUL4BQ13620 913 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 HERC4Q5GLZ8 1057 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-220ENST00000497506 SLC27A1Q6PCB7 646 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 KRBA2Q6ZNG9 492 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 ZNF720Q7Z2F6 126 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 MRPL10Q7Z7H8 261 aaKnown RBP17.83■□□□□ 0.44
FAM3A-220ENST00000497506 TIFAQ96CG3 184 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 ACO2Q99798 780 aaKnown RBP17.83■□□□□ 0.44
FAM3A-220ENST00000497506 ST6GALNAC4Q9H4F1 302 aa17.83■□□□□ 0.44
FAM3A-220ENST00000497506 PDZD7Q9H5P4 517 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms