RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CCDC62Q6P9F0 684 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 BMP8AQ7Z5Y6 402 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 TAX1BP1Q86VP1 789 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 DNERQ8NFT8 737 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 TGFBRAP1Q8WUH2 860 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 NKD2Q969F2 451 aaPredicted RBP5.28□□□□□ -1.56
SMC4-225ENST00000497203 DYDC2Q96IM9 177 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 NUP88Q99567 741 aaPredicted RBP5.28□□□□□ -1.56
SMC4-225ENST00000497203 RTFDC1Q9BY42 306 aaPredicted RBP5.28□□□□□ -1.56
SMC4-225ENST00000497203 RHOBTB2Q9BYZ6 727 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 PITHD1Q9GZP4 211 aaPredicted RBP5.28□□□□□ -1.56
SMC4-225ENST00000497203 HAPLN2Q9GZV7 340 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 DENND2AQ9ULE3 1009 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 CTDP1Q9Y5B0 961 aaPredicted RBP5.28□□□□□ -1.56
SMC4-225ENST00000497203 GPR45Q9Y5Y3 372 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 A0A0A6YYJ9 748 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 PRSS38A1L453 326 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 PATE3B3GLJ2 98 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 FOXS1O43638 330 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 PRC1O43663 620 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 OPHN1O60890 802 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 ATF3P18847 181 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 CR2P20023 1033 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 CYP2C19P33261 490 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 MAGEA10P43363 369 aaPredicted RBP5.27□□□□□ -1.57
SMC4-225ENST00000497203 ACAP1Q15027 740 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 LRRC41Q15345 812 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 CT83Q5H943 113 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 KLHDC10Q6PID8 442 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 GIMAP8Q8ND71 665 aaPredicted RBP5.27□□□□□ -1.57
SMC4-225ENST00000497203 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 QRSL1Q9H0R6 528 aaKnown RBP5.27□□□□□ -1.57
SMC4-225ENST00000497203 CD248Q9HCU0 757 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 POLR3BQ9NW08 1133 aaPredicted RBP5.27□□□□□ -1.57
SMC4-225ENST00000497203 PUF60Q9UHX1 559 aaKnown RBP5.27□□□□□ -1.57
SMC4-225ENST00000497203 DNAI1Q9UI46 699 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 VWA7Q9Y334 891 aa5.27□□□□□ -1.57
SMC4-225ENST00000497203 A0A0A6YYK5 440 aaPredicted RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 C2orf78A6NCI8 922 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA12O60330 932 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 CDC14BO60729 498 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDH8O95206 1070 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PFKMP08237 780 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 CLEC2LP0C7M8 214 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PF4V1P10720 104 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 AGXTP21549 392 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 MTNR1BP49286 362 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 GPR15P49685 360 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 ADAM17P78536 824 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 SRSF2Q01130 221 aaKnown RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 DUSP8Q13202 625 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 SPIDRQ14159 915 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 HLTFQ14527 1009 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMC4-225ENST00000497203 MLC1Q15049 377 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 CCDC178Q5BJE1 867 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PITRM1Q5JRX3 1037 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 TOR2AQ5JU69 321 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 CMTR2Q8IYT2 770 aaKnown RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 TTC9BQ8N6N2 239 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 MAGEB6Q8N7X4 407 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 EAF2Q96CJ1 260 aaPredicted RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 HSPBAP1Q96EW2 488 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 TEKT5Q96M29 485 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 WDR92Q96MX6 357 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 SOX7Q9BT81 388 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PLA2G12BQ9BX93 195 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 CSRNP2Q9H175 543 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 C12orf65Q9H3J6 166 aaKnown RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 ZNF277Q9NRM2 450 aaPredicted RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA9Q9Y5G4 932 aaKnown RBP5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA8Q9Y5G5 932 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA7Q9Y5G6 932 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA6Q9Y5G7 932 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA3Q9Y5H0 932 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 PCDHGA2Q9Y5H1 932 aa5.26□□□□□ -1.57
SMC4-225ENST00000497203 MYPNQ86TC9 1320 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 NRP2O60462 931 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 ZNF623O75123 536 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 IL33O95760 270 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 HNRNPLP14866 589 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMC4-225ENST00000497203 SESN2P58004 480 aaPredicted RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 ATP2C1P98194 919 aaPredicted RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 GTF2H3Q13889 308 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 MUM1Q2TAK8 710 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 ANO4Q32M45 955 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 GFOD2Q3B7J2 385 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 MBNL2Q5VZF2 373 aaKnown RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 KCNK18Q7Z418 384 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 GPR135Q8IZ08 494 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 FUKQ8N0W3 1084 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 CDYL2Q8N8U2 506 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 CHST13Q8NET6 341 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 OR14C36Q8NHC7 312 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 Q8TCH9 128 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 JADE3Q92613 823 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 GFM2Q969S9 779 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms