RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RFFLQ8WZ73 363 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 KIFC3Q9BVG8 833 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 GOLPH3Q9H4A6 298 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 HOXC10Q9NYD6 342 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 AFG3L2Q9Y4W6 797 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 ANKRD63C9JTQ0 380 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 STBD1O95210 358 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 TNFAIP3P21580 790 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 TNNC1P63316 161 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 PRKCEQ02156 737 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 SUPT20HL1Q3ZLR7 823 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 PEX26Q7Z412 305 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 GPC2Q8N158 579 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 MCPH1Q8NEM0 835 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 CTNNBL1Q8WYA6 563 aaPredicted RBP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 BSNDQ8WZ55 320 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 USP20Q9Y2K6 914 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 IGSF9BQ9UPX0 1349 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 GOLGA8IPA6NC78 632 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 GOLGA8JA6NMD2 632 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 FOXN3O00409 490 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-220ENST00000496711 DGAT1O75907 488 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 ADSSP30520 456 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 CYP2C19P33261 490 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 EPHB4P54760 987 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 RTP1P59025 263 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 ACTR2P61160 394 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 SH3D19Q5HYK7 790 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 SWSAP1Q6NVH7 229 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 CBWD2Q8IUF1 395 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 CCDC60Q8IWA6 550 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-220ENST00000496711 NLGN2Q8NFZ4 835 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 NTPCRQ9BSD7 190 aaKnown RBP14.13□□□□□ -0.15
GARNL3-220ENST00000496711 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
GARNL3-220ENST00000496711 VPS18Q9P253 973 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 SUCLA2Q9P2R7 463 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-220ENST00000496711 STXBP5LQ9Y2K9 1186 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 PFASO15067 1338 aa14.13□□□□□ -0.15
GARNL3-220ENST00000496711 ZC3H4Q9UPT8 1303 aaKnown RBP14.13□□□□□ -0.15
GARNL3-220ENST00000496711 TMCO5BA8MYB1 307 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 SPATA31C2B4DYI2 1134 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 CNGA1P29973 690 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 MRPS25P82663 173 aaKnown RBP14.12□□□□□ -0.15
GARNL3-220ENST00000496711 SP4Q02446 784 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 MIS18BP1Q6P0N0 1132 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 EMBQ6PCB8 327 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 ABHD15Q6UXT9 468 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 ACTRT1Q8TDG2 376 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 SAAL1Q96ER3 474 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 GDAP1L1Q96MZ0 367 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 CYP26B1Q9NR63 512 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.12□□□□□ -0.15
GARNL3-220ENST00000496711 HEXIM1O94992 359 aaKnown RBP14.12□□□□□ -0.15
GARNL3-220ENST00000496711 SUPT20HL2P0C7V6 817 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
GARNL3-220ENST00000496711 ABCB4P21439 1286 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 HIRAP54198 1017 aaPredicted RBP14.12□□□□□ -0.15
GARNL3-220ENST00000496711 SND1Q7KZF4 910 aaKnown RBP eCLIP14.12□□□□□ -0.15
GARNL3-220ENST00000496711 NT5DC3Q86UY8 548 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 IFT20Q8IY31 132 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 CHST13Q8NET6 341 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 SLC35G2Q8TBE7 412 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 EXOC4Q96A65 974 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 KRT12Q99456 494 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 HINFPQ9BQA5 517 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 PDLIM7Q9NR12 457 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 TMEM59LQ9UK28 342 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 PRDM4Q9UKN5 801 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
GARNL3-220ENST00000496711 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 ANKRD62A6NC57 917 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 H0YCG3 227 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 PGRMC1O00264 195 aaKnown RBP14.11□□□□□ -0.15
GARNL3-220ENST00000496711 CEP104O60308 925 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 ABCD1P33897 745 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 SOX10P56693 466 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
GARNL3-220ENST00000496711 PRKG1Q13976 671 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 PTPROQ16827 1216 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 KRT39Q6A163 491 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 SLC39A4Q6P5W5 647 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 USP37Q86T82 979 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 PALB2Q86YC2 1186 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 METTL13Q8N6R0 699 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 DNERQ8NFT8 737 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 TMC2Q8TDI7 906 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 SLC20A1Q8WUM9 679 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 CAVIN3Q969G5 261 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 HES6Q96HZ4 224 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 CALR3Q96L12 384 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms