RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 P2RX5Q93086 422 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TLCD1Q96CP7 247 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 EEF2KMTQ96G04 330 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 KLHL4Q9C0H6 718 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 UBN1Q9NPG3 1134 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CNOT7Q9UIV1 285 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 PLAGL2Q9UPG8 496 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 COQ6Q9Y2Z9 468 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 IDH1O75874 414 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 TNFAIP8O95379 198 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 GJB6O95452 261 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 CBX6O95503 412 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 FGFR4P22455 802 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 IFI35P80217 286 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 TFAP4Q01664 338 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 EXOSC10Q01780 885 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 WTAPQ15007 396 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 RARS2Q5T160 578 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 KLHDC7AQ5VTJ3 777 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 C4orf50Q6ZRC1 276 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 NME9Q86XW9 330 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 THEMISQ8N1K5 641 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 NLRP7Q8WX94 980 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 SERPINB12Q96P63 405 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 HAPLN3Q96S86 360 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 DNAI2Q9GZS0 605 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 OCEL1Q9H607 264 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 GIN1Q9NXP7 522 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 FBXO2Q9UK22 296 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 PHTF1Q9UMS5 762 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 ARHGEF5Q12774 1597 aa8.71□□□□□ -1.01
CRNKL1-205ENST00000496549 FAM196BA6NMK8 535 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 NOTOA8MTQ0 251 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 FBP2O00757 339 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 PRCPP42785 496 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 GEMIN4P57678 1058 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 KIAA1755Q5JYT7 1200 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CCSAPQ6IQ19 270 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 LPCAT2Q7L5N7 544 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 ANKLE2Q86XL3 938 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 ADSSL1Q8N142 457 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 SPATA5Q8NB90 893 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 EPS8L3Q8TE67 593 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 HSPBAP1Q96EW2 488 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 TRIM51Q9BSJ1 452 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 GDAQ9Y2T3 454 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 PCDHB6Q9Y5E3 794 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 AGLP35573 1532 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 A0A087WZG4 1122 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CCDC194A0A1B0GVG4 234 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 TRIM49BA6NDI0 452 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 FAM47DPA6NHR8 397 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 KPNA4O00629 521 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 XPOTO43592 962 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CCNE1P24864 410 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 OCA2Q04671 838 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 WASHC5Q12768 1159 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 STK4Q13043 487 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 TMEM266Q2M3C6 531 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 DTHD1Q6ZMT9 781 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 TRMT10CQ7L0Y3 403 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CKAP2Q8WWK9 683 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 IRGQQ8WZA9 623 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 GRIP2Q9C0E4 1043 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 CCDC134Q9H6E4 229 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 TRNAU1APQ9NX07 287 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 SEPT10Q9P0V9 454 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 SEPT3Q9UH03 358 aa8.71□□□□□ -1.02
CRNKL1-205ENST00000496549 WDR91A4D1P6 747 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 MMP1P03956 469 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 KRT18P05783 430 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 NUDT17P0C025 328 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ZNF12P17014 697 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 MX2P20592 715 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 EEF1DP29692 281 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ARL1P40616 181 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ERFP50548 548 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 POLR2FP61218 127 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 DPYDQ12882 1025 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 DNAJC3Q13217 504 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 SLC2A7Q6PXP3 512 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 SATL1Q86VE3 508 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 LRRC6Q86X45 466 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CYP4X1Q8N118 509 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 BBOF1Q8ND07 529 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 OR6Y1Q8NGX8 325 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 RIOK1Q9BRS2 568 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ERP44Q9BS26 406 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 LSM14BQ9BX40 385 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 GIMAP4Q9NUV9 329 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ANKFY1Q9P2R3 1169 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 NPHP4O75161 1426 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms