RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ASAP2O43150 1006 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 MBTPS2O43462 519 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 GAS2O43903 313 aaKnown RBP11.79□□□□□ -0.52
NELFE-213ENST00000494956 ZNF623O75123 536 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 DDHD2O94830 711 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 ERLIN2O94905 339 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 EDN1P05305 212 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 ARF4P18085 180 aaPredicted RBP11.79□□□□□ -0.52
NELFE-213ENST00000494956 RPA1P27694 616 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 NDUFV1P49821 464 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 PLCB3Q01970 1234 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 NOMO2Q5JPE7 1267 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 LLGL2Q6P1M3 1020 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
NELFE-213ENST00000494956 EFHBQ8N7U6 833 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 AUTS2Q8WXX7 1259 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 TCF25Q9BQ70 676 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 APOL5Q9BWW9 433 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
NELFE-213ENST00000494956 ENTPD7Q9NQZ7 604 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 SPG21Q9NZD8 308 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 RAPGEFL1Q9UHV5 662 aa11.79□□□□□ -0.52
NELFE-213ENST00000494956 ARHGEF35A5YM69 484 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 E9PMD0 336 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 POMCP01189 267 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 LIG1P18858 919 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 SSTR3P32745 418 aaPredicted RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 CA8P35219 290 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 SLC11A1P49279 550 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
NELFE-213ENST00000494956 RAB27AP51159 221 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 UBE3AQ05086 875 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 RNASELQ05823 741 aaKnown RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 TFDP1Q14186 410 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 MXD4Q14582 209 aaPredicted RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 MRPL10Q7Z7H8 261 aaKnown RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 ERMNQ8TAM6 284 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 NACC1Q96RE7 527 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 KIFC3Q9BVG8 833 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 VN1R3Q9BXE9 311 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 NXF3Q9H4D5 531 aaKnown RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 RSAD1Q9HA92 442 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 DDX19AQ9NUU7 478 aaKnown RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 MIOSQ9NXC5 875 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 LRWD1Q9UFC0 647 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 CD207Q9UJ71 328 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 CDH22Q9UJ99 828 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
NELFE-213ENST00000494956 KIAA1024Q9UPX6 916 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 IPPQ9Y573 584 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 NCOR1O75376 2440 aa11.78□□□□□ -0.52
NELFE-213ENST00000494956 F8W810 466 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 NPTXRO95502 500 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 GALTP07902 379 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 SKIP12755 728 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 XRCC6P12956 609 aaKnown RBP eCLIP11.77□□□□□ -0.53
NELFE-213ENST00000494956 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
NELFE-213ENST00000494956 AKAP5P24588 427 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 MLH1P40692 756 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 ALDH7A1P49419 539 aaKnown RBP11.77□□□□□ -0.53
NELFE-213ENST00000494956 ORC2Q13416 577 aaPredicted RBP11.77□□□□□ -0.53
NELFE-213ENST00000494956 DUSP6Q16828 381 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 TMC7Q7Z402 723 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 GJD3Q8N144 294 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 PGBD4Q96DM1 585 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 ZFP42Q96MM3 310 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 GAD1Q99259 594 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 PLIN2Q99541 437 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 MMTAG2Q9BU76 263 aaKnown RBP11.77□□□□□ -0.53
NELFE-213ENST00000494956 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
NELFE-213ENST00000494956 CSRNP2Q9H175 543 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 CACNG4Q9UBN1 327 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 SMC3Q9UQE7 1217 aa11.77□□□□□ -0.53
NELFE-213ENST00000494956 FAM86C2PA6NEL3 165 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 H3BQV1 296 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 NCK2O43639 380 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
NELFE-213ENST00000494956 ITGA4P13612 1032 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 CYP11B2P19099 503 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 PPM1AP35813 382 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 SCNN1GP51170 649 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 KRT17Q04695 432 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 ZP2Q05996 745 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 ZRSR1Q15695 479 aaKnown RBP11.76□□□□□ -0.53
NELFE-213ENST00000494956 LARP1BQ659C4 914 aaKnown RBP11.76□□□□□ -0.53
NELFE-213ENST00000494956 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
NELFE-213ENST00000494956 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms