RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SEPT11Q9NVA2 429 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 MCM3APO60318 1980 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 USP8P40818 1118 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ALDH5A1P51649 535 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ESYT3A0FGR9 886 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ATP2A1O14983 1001 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SOX5P35711 763 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 MOGSQ13724 837 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SNRNP35Q16560 246 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 TRAPPC12Q8WVT3 735 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 KREMEN1Q96MU8 473 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 NOX5Q96PH1 765 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 PDGFCQ9NRA1 345 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 MAP3K20Q9NYL2 800 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 APEX2Q9UBZ4 518 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 PTPRJQ12913 1337 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 MAPTP10636 758 aaKnown RBP11.29□□□□□ -0.6
SAMM50-206ENST00000494795 ACOT2P49753 483 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 GALCP54803 685 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 HSDL1Q3SXM5 330 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 TAS1R2Q8TE23 839 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 TATDN2Q93075 761 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 IQCDQ96DY2 449 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 RBPJLQ9UBG7 517 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 CSADQ9Y600 493 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 SGPL1O95470 568 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 SFNP31947 248 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 C2CD6Q53TS8 623 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 CDR2LQ86X02 465 aaPredicted RBP11.29□□□□□ -0.6
SAMM50-206ENST00000494795 SPATA4Q8NEY3 305 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 FAM213AQ9BRX8 229 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 SYT11Q9BT88 431 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 PORCNQ9H237 461 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 ARFGAP3Q9NP61 516 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 COG5Q9UP83 839 aa11.29□□□□□ -0.6
SAMM50-206ENST00000494795 SOCS7O14512 581 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 OAZ1P54368 228 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 DMP1Q13316 513 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 NFIL3Q16649 462 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 AADACL2Q6P093 401 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PHLDB2Q86SQ0 1253 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 SLC47A2Q86VL8 602 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 KRT222Q8N1A0 295 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 RIN2Q8WYP3 895 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 OPTNQ96CV9 577 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 DICER1Q9UPY3 1922 aaKnown RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PSAPP07602 524 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 SUPT20HL2P0C7V6 817 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PRKCIP41743 596 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 STXBP2Q15833 593 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 MYH9P35579 1960 aaKnown RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 HARSP12081 509 aaKnown RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 NLRP11P59045 1033 aaKnown RBP11.28□□□□□ -0.6
SAMM50-206ENST00000494795 LLGL1Q15334 1064 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 MAP4K3Q8IVH8 894 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PPM1KQ8N3J5 372 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 PPP1R16BQ96T49 567 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 STK33Q9BYT3 514 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 ANKEF1Q9NU02 776 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
SAMM50-206ENST00000494795 A0A0G2JLL6 359 aaPredicted RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 CYP26A1O43174 497 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms