RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CCDC140Q96MF4 163 aa6.29□□□□□ -1.4
PTCD3-219ENST00000494323 GDF15Q99988 308 aa6.29□□□□□ -1.4
PTCD3-219ENST00000494323 AARSD1Q9BTE6 412 aaKnown RBP6.29□□□□□ -1.4
PTCD3-219ENST00000494323 OSBPL5Q9H0X9 879 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-219ENST00000494323 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
PTCD3-219ENST00000494323 TXNRD2Q9NNW7 524 aa6.29□□□□□ -1.4
PTCD3-219ENST00000494323 PRKAB1Q9Y478 270 aa6.29□□□□□ -1.4
PTCD3-219ENST00000494323 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
PTCD3-219ENST00000494323 COL6A3P12111 3177 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 TRAV20A0A0B4J274 112 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 A0A1W2PPC1 479 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 SSU72P8A0A1W2PR75 194 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 KCNH1O95259 989 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 ASMTLO95671 621 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 HMGCRP04035 888 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 ITGB5P18084 799 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 CD96P40200 585 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 MAGEA10P43363 369 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 PPP2R2AP63151 447 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 GSTO1P78417 241 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 G3BP1Q13283 466 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 PABPC4Q13310 644 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 MVPQ14764 893 aaKnown RBP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 GTF2IRD2BQ6EKJ0 949 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 CRTC3Q6UUV7 619 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 GTF2IRD2Q86UP8 949 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 CREG2Q8IUH2 290 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 TEX11Q8IYF3 940 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 TRMT2AQ8IZ69 625 aaKnown RBP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 TRIB2Q92519 343 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 API5Q9BZZ5 524 aaKnown RBP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 C11orf49Q9H6J7 331 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 AATFQ9NY61 560 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTCD3-219ENST00000494323 PI4KBQ9UBF8 816 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 HDAC5Q9UQL6 1122 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 ALPK3Q96L96 1907 aa6.28□□□□□ -1.4
PTCD3-219ENST00000494323 DOCK2Q92608 1830 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 LAMA3Q16787 3333 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 WASH4PA8MWX3 477 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 BIN1O00499 593 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 PPP1R12AO14974 1030 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 ZNF205O95201 554 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 SYPP08247 313 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 FGFR1P11362 822 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 VAV1P15498 845 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 CAPN2P17655 700 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 CCND3P30281 292 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 MCAMP43121 646 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 BACE1P56817 501 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 IRX3P78415 501 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 CACNB2Q08289 660 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 IKZF1Q13422 519 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 TCEA2Q15560 299 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 CCL14Q16627 93 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 FOXP4Q8IVH2 680 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 MAPKAPK5Q8IW41 473 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 CCAR1Q8IX12 1150 aaKnown RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 SYNPOQ8N3V7 929 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 GPRC5AQ8NFJ5 357 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 PI4K2BQ8TCG2 481 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 KISS1RQ969F8 398 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 NOL10Q9BSC4 688 aaKnown RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 LGR4Q9BXB1 951 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 NKX2-4Q9H2Z4 354 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 RC3H2Q9HBD1 1191 aaKnown RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 AS3MTQ9HBK9 375 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 TMOD4Q9NZQ9 345 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 LMCD1Q9NZU5 365 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 SAP30BPQ9UHR5 308 aaKnown RBP6.27□□□□□ -1.41
PTCD3-219ENST00000494323 TCFL5Q9UL49 500 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 OGDHLQ9ULD0 1010 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 TNNQ9UQP3 1299 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 PCDHA11Q9Y5I1 949 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 COL4A3BPQ9Y5P4 624 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 RFX7Q2KHR2 1363 aa6.27□□□□□ -1.41
PTCD3-219ENST00000494323 PDS5AQ29RF7 1337 aaKnown RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 DOCK1Q14185 1865 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 PNMA6EA0A0J9YXQ4 647 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 C19orf81C9J6K1 198 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 DNAJC6O75061 913 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 BAG3O95817 575 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 ESR1P03372 595 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 CD3EP07766 207 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 GNAI3P08754 354 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 HOXA7P31268 230 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 HOXC12P31275 282 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 RARSP54136 660 aaKnown RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 HERVK_113P62684 666 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 DYNLL1P63167 89 aaKnown RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 EGR3Q06889 387 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 MAP3K21Q5TCX8 1036 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 NAA16Q6N069 864 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms