RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CALML6Q8TD86 181 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 RIN2Q8WYP3 895 aaPredicted RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 ANKS1AQ92625 1134 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 GCC1Q96CN9 775 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 MTFMTQ96DP5 389 aaKnown RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 TMEM41AQ96HV5 264 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 UNKQ9C0B0 810 aaKnown RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PITHD1Q9GZP4 211 aaPredicted RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PAK6Q9NQU5 681 aaPredicted RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 LMCD1Q9NZU5 365 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 SLC5A6Q9Y289 635 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PCDHGB3Q9Y5G1 929 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 A0A087WV62 115 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-208ENST00000493903 A0A1W2PQJ5 194 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 ISM1B1AKI9 464 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 ADAMTS3O15072 1205 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 KPNA5O15131 536 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 SGTAO43765 313 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 NRP2O60462 931 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 FGF18O76093 207 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 ARIH2O95376 493 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 FAM163BP0C2L3 166 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 CD8BP10966 210 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 STT3AP46977 705 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 HK3P52790 923 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 IRX6P78412 446 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-208ENST00000493903 PRKCQQ04759 706 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 PPARAQ07869 468 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 MGAT2Q10469 447 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 DBPQ10586 325 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-208ENST00000493903 BLMHQ13867 455 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 AOC3Q16853 763 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 PGBD2Q6P3X8 592 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 MZT2AQ6P582 158 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 FAM180AQ6UWF9 173 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 CEP128Q6ZU80 1094 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 ANKRD18AQ8IVF6 992 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 ABI1Q8IZP0 508 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 ZSCAN18Q8TBC5 510 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-208ENST00000493903 NSUN6Q8TEA1 469 aaKnown RBP5.35□□□□□ -1.55
GTF3A-208ENST00000493903 GAB3Q8WWW8 586 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 KIAA1191Q96A73 305 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 MISP3Q96FF7 219 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 HRASLS5Q96KN8 279 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 PAGR1Q9BTK6 254 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 KIAA1586Q9HCI6 787 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 SAGE1Q9NXZ1 904 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 HSPBP1Q9NZL4 362 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
GTF3A-208ENST00000493903 NUDT5Q9UKK9 219 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 PALD1Q9ULE6 856 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 PCDHB6Q9Y5E3 794 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 SNX13Q9Y5W8 968 aa5.35□□□□□ -1.55
GTF3A-208ENST00000493903 SGSM2O43147 1006 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 PCDH8O95206 1070 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 GSPT1P15170 499 aaKnown RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 FUT4P22083 530 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 XPAP23025 273 aaPredicted RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 DDX10Q13206 875 aaKnown RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 SLC14A2Q15849 920 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 SLC4A8Q2Y0W8 1093 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 CCDC157Q569K6 752 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 HYIQ5T013 277 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 SYDE1Q6ZW31 735 aaPredicted RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 TMC6Q7Z403 805 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 MILR1Q7Z6M3 343 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 SPPL2CQ8IUH8 684 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 DRC7Q8IY82 874 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 CLASRPQ8N2M8 674 aaKnown RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 MYCT1Q8N699 235 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 SKA1Q96BD8 255 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 TMX4Q9H1E5 349 aaPredicted RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 ATP6V0A4Q9HBG4 840 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 EPB41L4AQ9HCS5 686 aaPredicted RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 PNPLA8Q9NP80 782 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 RBM12Q9NTZ6 932 aaKnown RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 EBF1Q9UH73 591 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 CDC23Q9UJX2 597 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 VAV3Q9UKW4 847 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 CORO2BQ9UQ03 480 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 GPR52Q9Y2T5 361 aa5.34□□□□□ -1.55
GTF3A-208ENST00000493903 LRRFIP2Q9Y608 721 aaKnown RBP5.34□□□□□ -1.55
GTF3A-208ENST00000493903 A0A0A6YYJ9 748 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 NFIBO00712 420 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 EPB41L2O43491 1005 aaKnown RBP5.33□□□□□ -1.56
GTF3A-208ENST00000493903 NCK2O43639 380 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 OPHN1O60890 802 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 MAFO75444 373 aaPredicted RBP5.33□□□□□ -1.56
GTF3A-208ENST00000493903 USP2O75604 605 aaPredicted RBP5.33□□□□□ -1.56
GTF3A-208ENST00000493903 THP07101 528 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 CELA3BP08861 270 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 ZGLP1P0C6A0 271 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 MSL3P1P0C860 447 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 TSHRP16473 764 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 PRKCAP17252 672 aa5.33□□□□□ -1.56
GTF3A-208ENST00000493903 PTGS1P23219 599 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms