RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 NSUN6Q8TEA1 469 aaKnown RBP21.36■■□□□ 1.01
RNF40-203ENST00000493683 FAM161BQ96MY7 647 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 DDX47Q9H0S4 455 aaKnown RBP21.36■■□□□ 1.01
RNF40-203ENST00000493683 PARVAQ9NVD7 372 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 TBCCQ15814 346 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 ENAHQ8N8S7 591 aaPredicted RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 ULK4Q96C45 1275 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 EML4Q9HC35 981 aaKnown RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 LIMA1Q9UHB6 759 aaKnown RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 E9PMD0 336 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 KCNA4P22459 653 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 BCAR1P56945 870 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 ANGPTL8Q6UXH0 198 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 CYB5R4Q7L1T6 521 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 FNDC3AQ9Y2H6 1198 aaKnown RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 HEY1Q9Y5J3 304 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 ITIH6Q6UXX5 1313 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 SYF2O95926 243 aaKnown RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 RECQLP46063 649 aaPredicted RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 ARPP19P56211 112 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 ZNF568Q3ZCX4 644 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 SUSD4Q5VX71 490 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 RMDN3Q96TC7 470 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 EFHC2Q5JST6 749 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 SH3RF3Q8TEJ3 882 aaPredicted RBP21.35■■□□□ 1.01
RNF40-203ENST00000493683 ZNF341Q9BYN7 854 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 SLC9A2Q9UBY0 812 aa21.35■■□□□ 1.01
RNF40-203ENST00000493683 MAP3K10Q02779 954 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 TXNRD1Q16881 649 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 CIAPIN1Q6FI81 312 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 ARHGEF9O43307 516 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 PSMC1P62191 440 aaKnown RBP21.34■■□□□ 1.01
RNF40-203ENST00000493683 CCDC144BQ3MJ40 725 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 IZUMO3Q5VZ72 239 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 ZBED8Q8IZ13 594 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 NAF1Q96HR8 494 aaKnown RBP21.34■■□□□ 1.01
RNF40-203ENST00000493683 ARL2BPQ9Y2Y0 163 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 PDXKO00764 312 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 STAT3P40763 770 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 CAPRIN1Q14444 709 aaKnown RBP21.34■■□□□ 1.01
RNF40-203ENST00000493683 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 RASSF3Q86WH2 238 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 SPATA4Q8NEY3 305 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 RNF25Q96BH1 459 aaPredicted RBP21.34■■□□□ 1.01
RNF40-203ENST00000493683 FAM213AQ9BRX8 229 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 FOXP3Q9BZS1 431 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 MYO5CQ9NQX4 1742 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 DENND3A2RUS2 1198 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 DIAPH2O60879 1101 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 FLOT2Q14254 428 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 SLC27A3Q5K4L6 730 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 MTHFD1LQ6UB35 978 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 NOP9Q86U38 636 aaKnown RBP21.34■■□□□ 1.01
RNF40-203ENST00000493683 FBXL5Q9UKA1 691 aa21.34■■□□□ 1.01
RNF40-203ENST00000493683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.33■■□□□ 1.01
RNF40-203ENST00000493683 RASSF10A6NK89 507 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 PI4K2BG5E9Z4 385 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 ORC4O43929 436 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 ATP6V1E1P36543 226 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 PSMC5P62195 406 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 NBPF20Q3BBV1 942 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 STAG2Q8N3U4 1231 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 TMCO5AQ8N6Q1 288 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 ALKBH8Q96BT7 664 aaKnown RBP21.33■■□□□ 1.01
RNF40-203ENST00000493683 STX18Q9P2W9 335 aaKnown RBP21.33■■□□□ 1.01
RNF40-203ENST00000493683 GH2P01242 217 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 CYP2E1P05181 493 aaPredicted RBP21.33■■□□□ 1.01
RNF40-203ENST00000493683 IL10P22301 178 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 KRT33BQ14525 404 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 PDIA5Q14554 519 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 ATL2Q8NHH9 583 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 MRPL4Q9BYD3 311 aaKnown RBP21.33■■□□□ 1.01
RNF40-203ENST00000493683 ZHX2Q9Y6X8 837 aa21.33■■□□□ 1.01
RNF40-203ENST00000493683 KIF1CO43896 1103 aaKnown RBP21.33■■□□□ 1.01
RNF40-203ENST00000493683 UBN2Q6ZU65 1347 aa21.33■■□□□ 1
RNF40-203ENST00000493683 PBRM1Q86U86 1689 aa21.33■■□□□ 1
RNF40-203ENST00000493683 M0QYV0 167 aa21.33■■□□□ 1
RNF40-203ENST00000493683 TMEM259Q4ZIN3 620 aa21.33■■□□□ 1
RNF40-203ENST00000493683 RTN2O75298 545 aa21.33■■□□□ 1
RNF40-203ENST00000493683 NSUN2Q08J23 767 aaKnown RBP eCLIP21.33■■□□□ 1
RNF40-203ENST00000493683 Q3C1V9 767 aa21.33■■□□□ 1
RNF40-203ENST00000493683 GPD1LQ8N335 351 aa21.33■■□□□ 1
RNF40-203ENST00000493683 CCNYL1Q8N7R7 359 aa21.33■■□□□ 1
RNF40-203ENST00000493683 RNF217Q8TC41 542 aa21.33■■□□□ 1
RNF40-203ENST00000493683 MASTLQ96GX5 879 aa21.33■■□□□ 1
RNF40-203ENST00000493683 KLC4Q9NSK0 619 aa21.33■■□□□ 1
RNF40-203ENST00000493683 ADA2Q9NZK5 511 aa21.33■■□□□ 1
RNF40-203ENST00000493683 SNX12Q9UMY4 172 aa21.33■■□□□ 1
RNF40-203ENST00000493683 SAMD9LQ8IVG5 1584 aa21.32■■□□□ 1
RNF40-203ENST00000493683 SLC16A4O15374 487 aa21.32■■□□□ 1
RNF40-203ENST00000493683 MYO1DO94832 1006 aa21.32■■□□□ 1
RNF40-203ENST00000493683 PRR29P0C7W0 189 aa21.32■■□□□ 1
RNF40-203ENST00000493683 DCTN4Q9UJW0 460 aa21.32■■□□□ 1
RNF40-203ENST00000493683 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
RNF40-203ENST00000493683 SSU72P8A0A1W2PR75 194 aa21.32■■□□□ 1
RNF40-203ENST00000493683 RAD23BP54727 409 aa21.32■■□□□ 1
RNF40-203ENST00000493683 SPATA21Q7Z572 469 aa21.32■■□□□ 1
RNF40-203ENST00000493683 THOC1Q96FV9 657 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms