RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 RPGRIP1Q96KN7 1286 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 CDH22Q9UJ99 828 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 HCN4Q9Y3Q4 1203 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 TRIOO75962 3097 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 TSPAN1O60635 241 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 USO1O60763 962 aaKnown RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 CLASP2O75122 1294 aaKnown RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 DDHD2O94830 711 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 ERLIN2O94905 339 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 LYPLA2O95372 231 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 POMCP01189 267 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 GALTP07902 379 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 SRGAP2BP0DMP2 458 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 PTENP60484 403 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 CAPSQ13938 189 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 SYCE2Q6PIF2 218 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 MRPL10Q7Z7H8 261 aaKnown RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 MRPL43Q8N983 215 aaKnown RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 SMG8Q8ND04 991 aaKnown RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 URGCPQ8TCY9 931 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 IGSF21Q96ID5 467 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 KIF2CQ99661 725 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 EIF2AQ9BY44 585 aaKnown RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 POLR3FQ9H1D9 316 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-223ENST00000493618 RSAD1Q9HA92 442 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 ANKEF1Q9NU02 776 aa16.3■□□□□ 0.2
ATG4B-223ENST00000493618 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-223ENST00000493618 FSD2A1L4K1 749 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 LOC730098B7Z3J9 87 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 MED24O75448 989 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 SPATA31C1P0DKV0 1188 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 GLRA2P23416 452 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 SP100P23497 879 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-223ENST00000493618 ARL2P36404 184 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 RARRES1P49788 294 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 TFDP1Q14186 410 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-223ENST00000493618 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 TMEM184AQ6ZMB5 413 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 VN1R3Q9BXE9 311 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 S1PR5Q9H228 398 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 GPRC5CQ9NQ84 441 aa16.29■□□□□ 0.2
ATG4B-223ENST00000493618 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 DGAT1O75907 488 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 ITGA4P13612 1032 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 NCLP19338 710 aaKnown RBP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 MBTD1Q05BQ5 628 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 NBR1Q14596 966 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 KANK3Q6NY19 840 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 DDX53Q86TM3 631 aaKnown RBP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 CDR2LQ86X02 465 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 CATSPER3Q86XQ3 398 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 SUSD6Q92537 303 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 CASP10Q92851 521 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 FAM193BQ96PV7 902 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 LLPHQ9BRT6 129 aaKnown RBP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 PHF7Q9BWX1 381 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-223ENST00000493618 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 HES2Q9Y543 173 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 IPPQ9Y573 584 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 HCFC2Q9Y5Z7 792 aa16.28■□□□□ 0.2
ATG4B-223ENST00000493618 CNTNAP2Q9UHC6 1331 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 B4GALT5O43286 388 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 WEE2P0C1S8 567 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 OR52Z1P0C646 297 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
ATG4B-223ENST00000493618 CBX2Q14781 532 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-223ENST00000493618 HERC4Q5GLZ8 1057 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-223ENST00000493618 NOTUMQ6P988 496 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 POTEGQ6S5H5 508 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 C12orf76Q8N812 135 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-223ENST00000493618 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 TMEM87AQ8NBN3 555 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-223ENST00000493618 TUFT1Q9NNX1 390 aa16.27■□□□□ 0.2
ATG4B-223ENST00000493618 DENND4AQ7Z401 1863 aa16.27■□□□□ 0.19
ATG4B-223ENST00000493618 LRRIQ4A6NIV6 560 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 CTSAP10619 480 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 EPCAMP16422 314 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 ARF4P18085 180 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-223ENST00000493618 MLH1P40692 756 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 BMS1Q14692 1282 aaKnown RBP16.26■□□□□ 0.19
ATG4B-223ENST00000493618 AMHR2Q16671 573 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 RARS2Q5T160 578 aaKnown RBP16.26■□□□□ 0.19
ATG4B-223ENST00000493618 FBXO18Q8NFZ0 1043 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 RSPH1Q8WYR4 309 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 GAD1Q99259 594 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 CSRNP2Q9H175 543 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-223ENST00000493618 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
ATG4B-223ENST00000493618 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 MIOSQ9NXC5 875 aa16.26■□□□□ 0.19
ATG4B-223ENST00000493618 FAN1Q9Y2M0 1017 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms