RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 A0A087WZ62 844 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 DDHD2O94830 711 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 EFEMP2O95967 443 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 ALDH2P05091 517 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 DNM2P50570 870 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 JAK3P52333 1124 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 RCAN1P53805 252 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 STARD6P59095 220 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 HTR4Q13639 388 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 UGCGQ16739 394 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 PFKFB3Q16875 520 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 DCLRE1AQ6PJP8 1040 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 AGMOQ6ZNB7 445 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 RNF168Q8IYW5 571 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 RDM1Q8NG50 284 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 SMG7Q92540 1137 aaKnown RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 RIT2Q99578 217 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 FDXACB1Q9BRP7 624 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 LSG1Q9H089 658 aaKnown RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 RXFP1Q9HBX9 757 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 FAN1Q9Y2M0 1017 aa16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 TDRD15B5MCY1 1934 aaKnown RBP16.03■□□□□ 0.16
PRPF40A-211ENST00000493468 NRP1O14786 923 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 TEX28O15482 410 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 ZBTB43O43298 467 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 LAMP2P13473 410 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 GLULP15104 373 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 LONRF3Q496Y0 759 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 MRPL10Q7Z7H8 261 aaKnown RBP16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 MAML2Q8IZL2 1156 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 CCDC12Q8WUD4 166 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 SHDQ96IW2 340 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 FAM193BQ96PV7 902 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 RSAD1Q9HA92 442 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 ZDHHC7Q9NXF8 308 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 FBXO4Q9UKT5 387 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 ZFP37Q9Y6Q3 630 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-211ENST00000493468 MAP1BP46821 2468 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 POTEMA6NI47 508 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 GLUD2P49448 558 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 AK2P54819 239 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 XKR3Q5GH77 459 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 KIAA0319Q5VV43 1072 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 CREB3L3Q68CJ9 461 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 CATSPER4Q7RTX7 472 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 GPR65Q8IYL9 337 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 C6orf50Q9HD87 102 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 ZFHX4Q86UP3 3567 aa16.01■□□□□ 0.15
PRPF40A-211ENST00000493468 C2CD2LO14523 706 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 MSH4O15457 936 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 GAS7O60861 476 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 RFPL2O75678 378 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 MAGEA9P43362 315 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 DSG1Q02413 1049 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 MTERF2Q49AM1 385 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 VARS2Q5ST30 1063 aaKnown RBP16■□□□□ 0.15
PRPF40A-211ENST00000493468 RHPN2Q8IUC4 686 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 SLC5A5Q92911 643 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 DDX23Q9BUQ8 820 aaKnown RBP16■□□□□ 0.15
PRPF40A-211ENST00000493468 OSBPL6Q9BZF3 934 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 FOXQ1Q9C009 403 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 FAM217BQ9NTX9 383 aaPredicted RBP16■□□□□ 0.15
PRPF40A-211ENST00000493468 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
PRPF40A-211ENST00000493468 NCDNQ9UBB6 729 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 PCDHGA2Q9Y5H1 932 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 DOCK6Q96HP0 2047 aa16■□□□□ 0.15
PRPF40A-211ENST00000493468 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 GOLGA8BA8MQT2 603 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 PRR5-ARHGAP8B1AHC4 643 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 ADAMTS3O15072 1205 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 STBD1O95210 358 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 GNA11P29992 359 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 AFF1P51825 1210 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 ARHGAP8P85298 464 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 JPH2Q9BR39 696 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 TEKT3Q9BXF9 490 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 BCO2Q9BYV7 579 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 PRKD2Q9BZL6 878 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 UNC45AQ9H3U1 944 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 IFT122Q9HBG6 1241 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 UBN1Q9NPG3 1134 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 NUMBLQ9Y6R0 609 aa15.99■□□□□ 0.15
PRPF40A-211ENST00000493468 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
PRPF40A-211ENST00000493468 CHMP2AO43633 222 aa15.98■□□□□ 0.15
PRPF40A-211ENST00000493468 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
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