RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RFX1P22670 979 aa19.82■□□□□ 0.76
NUP50-218ENST00000493456 B3GNT9Q6UX72 402 aa19.82■□□□□ 0.76
NUP50-218ENST00000493456 PHKBQ93100 1093 aa19.82■□□□□ 0.76
NUP50-218ENST00000493456 YTHDC1Q96MU7 727 aaKnown RBP19.82■□□□□ 0.76
NUP50-218ENST00000493456 WDR6Q9NNW5 1121 aaKnown RBP19.82■□□□□ 0.76
NUP50-218ENST00000493456 EPS15L1Q9UBC2 864 aa19.82■□□□□ 0.76
NUP50-218ENST00000493456 FAN1Q9Y2M0 1017 aa19.82■□□□□ 0.76
NUP50-218ENST00000493456 STK25O00506 426 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 NARSO43776 548 aaKnown RBP19.81■□□□□ 0.76
NUP50-218ENST00000493456 N4BP1O75113 896 aaKnown RBP19.81■□□□□ 0.76
NUP50-218ENST00000493456 DDHD2O94830 711 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 MRPL10Q7Z7H8 261 aaKnown RBP19.81■□□□□ 0.76
NUP50-218ENST00000493456 RPS6KC1Q96S38 1066 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 SH2D3AQ9BRG2 576 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 HERC2P3Q9BVR0 1158 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 IFT122Q9HBG6 1241 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 SH3GLB2Q9NR46 395 aa19.81■□□□□ 0.76
NUP50-218ENST00000493456 CLUHO75153 1309 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 DDX11L8A8MPP1 907 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 NRP1O14786 923 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 GLUD1P00367 558 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 CFHP08603 1231 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 SRFP11831 508 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 GBP2P32456 591 aaPredicted RBP19.8■□□□□ 0.76
NUP50-218ENST00000493456 BMP2KLQ5H9B9 411 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 Q6ZUG5 572 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 KSR1Q8IVT5 923 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 EXOC8Q8IYI6 725 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 KCNG4Q8TDN1 519 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 TBCKQ8TEA7 893 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 BRF1Q92994 677 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 GJA10Q969M2 543 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 UBN1Q9NPG3 1134 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 VPS54Q9P1Q0 977 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 PPME1Q9Y570 386 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 COL4A3BPQ9Y5P4 624 aa19.8■□□□□ 0.76
NUP50-218ENST00000493456 CYP3A7-CYP3A51PA0A087WV96 503 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 CCDC195A0A1B0GUA6 201 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 KRBA1A5PL33 1030 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 CYP3A7P24462 503 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 AK2P54819 239 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 PSMC5P62195 406 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 NTRK3Q16288 839 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 ZC3H14Q6PJT7 736 aaKnown RBP19.79■□□□□ 0.76
NUP50-218ENST00000493456 ANO5Q75V66 913 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 SRGAP1Q7Z6B7 1085 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 FBXL16Q8N461 479 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 CNNM3Q8NE01 707 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 HDAC7Q8WUI4 952 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 SLC7A3Q8WY07 619 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 SLC26A6Q9BXS9 759 aa19.79■□□□□ 0.76
NUP50-218ENST00000493456 EP300Q09472 2414 aaPredicted RBP19.78■□□□□ 0.76
NUP50-218ENST00000493456 C2CD2LO14523 706 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 INPPL1O15357 1258 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 TEX28O15482 410 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 PAPLNO95428 1278 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 C1RP00736 705 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 POMCP01189 267 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 IFNAR1P17181 557 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 NCLP19338 710 aaKnown RBP19.78■□□□□ 0.76
NUP50-218ENST00000493456 GLUD2P49448 558 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 AFF1P51825 1210 aaKnown RBP19.78■□□□□ 0.76
NUP50-218ENST00000493456 MOXD1Q6UVY6 613 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 SLC44A3Q8N4M1 653 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 ETNPPLQ8TBG4 499 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 TBC1D17Q9HA65 648 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 MARCH5Q9NX47 278 aa19.78■□□□□ 0.76
NUP50-218ENST00000493456 DKC1O60832 514 aaKnown RBP eCLIP19.77■□□□□ 0.76
NUP50-218ENST00000493456 NLRP5P59047 1200 aa19.77■□□□□ 0.76
NUP50-218ENST00000493456 PLA2G4FQ68DD2 849 aa19.77■□□□□ 0.76
NUP50-218ENST00000493456 PHLDB3Q6NSJ2 640 aa19.77■□□□□ 0.76
NUP50-218ENST00000493456 RNF168Q8IYW5 571 aaPredicted RBP19.77■□□□□ 0.76
NUP50-218ENST00000493456 PSPC1Q8WXF1 523 aaKnown RBP19.77■□□□□ 0.76
NUP50-218ENST00000493456 RSAD2Q8WXG1 361 aa19.77■□□□□ 0.76
NUP50-218ENST00000493456 SMG7Q92540 1137 aaKnown RBP19.77■□□□□ 0.76
NUP50-218ENST00000493456 RXFP1Q9HBX9 757 aa19.77■□□□□ 0.76
NUP50-218ENST00000493456 CA14Q9ULX7 337 aa19.77■□□□□ 0.76
NUP50-218ENST00000493456 PRG3Q9Y2Y8 225 aaPredicted RBP19.77■□□□□ 0.76
NUP50-218ENST00000493456 TDP2O95551 362 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 EFEMP2O95967 443 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 HOXA11P31270 313 aaPredicted RBP19.76■□□□□ 0.75
NUP50-218ENST00000493456 DSG1Q02413 1049 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 PCBP1Q15365 356 aaKnown RBP eCLIP19.76■□□□□ 0.75
NUP50-218ENST00000493456 UBXN11Q5T124 520 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 KIAA0319Q5VV43 1072 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 BLOC1S2Q6QNY1 142 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 COLGALT2Q8IYK4 626 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 RMDN1Q96DB5 314 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 MBOAT7Q96N66 472 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 MYADMQ96S97 322 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 PLEKHA4Q9H4M7 779 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 ZDHHC7Q9NXF8 308 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.76■□□□□ 0.75
NUP50-218ENST00000493456 PCDHA4Q9UN74 947 aa19.76■□□□□ 0.75
NUP50-218ENST00000493456 GAS2O43903 313 aaKnown RBP19.75■□□□□ 0.75
NUP50-218ENST00000493456 ITGA4P13612 1032 aa19.75■□□□□ 0.75
NUP50-218ENST00000493456 CPA1P15085 419 aa19.75■□□□□ 0.75
NUP50-218ENST00000493456 RFC5P40937 340 aa19.75■□□□□ 0.75
NUP50-218ENST00000493456 OR1G1P47890 313 aa19.75■□□□□ 0.75
NUP50-218ENST00000493456 QARSP47897 775 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms