RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 DNAJB4Q9UDY4 337 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 CA8P35219 290 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 SLC11A1P49279 550 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 AFF1P51825 1210 aaKnown RBP24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 GUCY1B3Q02153 619 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 MXD4Q14582 209 aaPredicted RBP24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 ZNF280BQ86YH2 543 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 TMEM60Q9H2L4 133 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 RSAD1Q9HA92 442 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 HCFC2Q9Y5Z7 792 aa24.68■■□□□ 1.54
LYSMD4-208ENST00000493256 CARNS1A5YM72 827 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 CLASP2O75122 1294 aaKnown RBP24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 CXCL14O95715 111 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 HOXB8P17481 243 aaPredicted RBP24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 PTENP60484 403 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 DDX53Q86TM3 631 aaKnown RBP24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 URGCPQ8TCY9 931 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 ASAP3Q8TDY4 903 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 AUTS2Q8WXX7 1259 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 CASP10Q92851 521 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 LIMCH1Q9UPQ0 1083 aa24.67■■□□□ 1.54
LYSMD4-208ENST00000493256 CNTNAP2Q9UHC6 1331 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 POTEMA6NI47 508 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 TSPAN1O60635 241 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 DGAT1O75907 488 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 ERLIN2O94905 339 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 ATP2B1P20020 1258 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 RARRES1P49788 294 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 BMS1Q14692 1282 aaKnown RBP24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 HFE2Q6ZVN8 426 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 CCDC83Q8IWF9 413 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 PIGOQ8TEQ8 1089 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 EDAQ92838 391 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 VN1R3Q9BXE9 311 aa24.66■■□□□ 1.54
LYSMD4-208ENST00000493256 A0A087WWV3 80 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 DDHD2O94830 711 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 CTSAP10619 480 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 NCLP19338 710 aaKnown RBP24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 MCM7P33993 719 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 ARL2P36404 184 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 CAPSQ13938 189 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 TFDP1Q14186 410 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 IFNLR1Q8IU57 520 aaPredicted RBP24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 SMG8Q8ND04 991 aaKnown RBP24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 CCDC43Q96MW1 224 aaKnown RBP24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 EIF2AQ9BY44 585 aaKnown RBP24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 CDH22Q9UJ99 828 aa24.65■■□□□ 1.54
LYSMD4-208ENST00000493256 ZNF318Q5VUA4 2279 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 INO80B-WBP1J3KQ70 363 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 AXLP30530 894 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 MBTD1Q05BQ5 628 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 POU5F1BQ06416 359 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 PCBP1Q15365 356 aaKnown RBP eCLIP24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 SAFBQ15424 915 aaKnown RBP eCLIP24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 TPRNQ4KMQ1 711 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 CPB2Q96IY4 423 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 IRAK3Q9Y616 596 aa24.64■■□□□ 1.54
LYSMD4-208ENST00000493256 POMCP01189 267 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 SPATA31C1P0DKV0 1188 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 GLRA2P23416 452 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 AMHR2Q16671 573 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 NOTUMQ6P988 496 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 CNNM3Q8NE01 707 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 CCDC51Q96ER9 411 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 C8orf76Q96K31 380 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 LLPHQ9BRT6 129 aaKnown RBP24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 KANSL3Q9P2N6 904 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 IPPQ9Y573 584 aa24.63■■□□□ 1.53
LYSMD4-208ENST00000493256 USO1O60763 962 aaKnown RBP24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 ITGA4P13612 1032 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 GIT2Q14161 759 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 TMEM175Q9BSA9 504 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 CSRNP2Q9H175 543 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 POLR3FQ9H1D9 316 aaPredicted RBP24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 RNF39Q9H2S5 420 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 ADAM7Q9H2U9 754 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 UBN1Q9NPG3 1134 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 HES2Q9Y543 173 aa24.62■■□□□ 1.53
LYSMD4-208ENST00000493256 XRCC6P12956 609 aaKnown RBP eCLIP24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 SP100P23497 879 aaPredicted RBP24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 ZXDAP98168 799 aa24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 NCBP1Q09161 790 aaKnown RBP24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 PTPN14Q15678 1187 aa24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 CATSPER3Q86XQ3 398 aa24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 TMEM87AQ8NBN3 555 aa24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 FAM193BQ96PV7 902 aaPredicted RBP24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 NFKBIZQ9BYH8 718 aa24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 TUFT1Q9NNX1 390 aa24.61■■□□□ 1.53
LYSMD4-208ENST00000493256 PIEZO1Q92508 2521 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 NRP1O14786 923 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 INPPL1O15357 1258 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 MED24O75448 989 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 EPCAMP16422 314 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 ARF4P18085 180 aaPredicted RBP24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 ITIH3Q06033 890 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 CES5AQ6NT32 575 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 TRIM67Q6ZTA4 783 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 SLC22A17Q8WUG5 538 aa24.6■■□□□ 1.53
LYSMD4-208ENST00000493256 GAD1Q99259 594 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms