RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 ARF4P18085 180 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 EFNA5P52803 228 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 MAPK6Q16659 721 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 CLLU1OSQ5K130 101 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 UBXN11Q5T124 520 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 MRPL10Q7Z7H8 261 aaKnown RBP11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 DAW1Q8N136 415 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 LARP4BQ92615 738 aaKnown RBP11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 RAD54LQ92698 747 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 CASD1Q96PB1 797 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 PLIN2Q99541 437 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 CCDC113Q9H0I3 377 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 LMAN2LQ9H0V9 348 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 FZD8Q9H461 694 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 STK17AQ9UEE5 414 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 A0A1B0GUA9 196 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 CARNS1A5YM72 827 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 N4BP3O15049 544 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 SPTLC2O15270 562 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 PRKCBP05771 671 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 LAG3P18627 525 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 MAPK7Q13164 816 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 PKP1Q13835 747 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 TIGD5Q53EQ6 642 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 SPOUT1Q5T280 376 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 FOXD4L5Q5VV16 416 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 SLC27A1Q6PCB7 646 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 GLB1LQ6UWU2 654 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 HACE1Q8IYU2 909 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 FOXD4L4Q8WXT5 416 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 MRPL38Q96DV4 380 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 CPB2Q96IY4 423 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 CLIC6Q96NY7 704 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 TRIM6Q9C030 488 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 BLOC1S4Q9NUP1 217 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 TYW1Q9NV66 732 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 PCDHB12Q9Y5F1 795 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
CDC42SE1-206ENST00000492796 TRANK1O15050 2925 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 PLXNA4Q9HCM2 1894 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 ACKR2O00590 384 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 B4GALT5O43286 388 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 BRD1O95696 1058 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 PLS3P13797 630 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 DDIT3P35638 169 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 PPM1AP35813 382 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 NPTX2P47972 431 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 SMTNP53814 917 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 PEX3P56589 373 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 UBE3AQ05086 875 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 PRPF4BQ13523 1007 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 COLGALT1Q8NBJ5 622 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 SMG8Q8ND04 991 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 URGCPQ8TCY9 931 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 LRRC15Q8TF66 581 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 LPPQ93052 612 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 KIFC3Q9BVG8 833 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 EIF2AQ9BY44 585 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 CWH43Q9H720 699 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 RSAD1Q9HA92 442 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 KMT5AQ9NQR1 393 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 LARSQ9P2J5 1176 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 ARHGAP28Q9P2N2 729 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 IPPQ9Y573 584 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
CDC42SE1-206ENST00000492796 CCDC169A6NNP5 214 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 H0YCG3 227 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 K7ERI5 159 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 INPPL1O15357 1258 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 CUTAO60888 179 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 OFD1O75665 1012 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 ITGA4P13612 1032 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 SCP2P22307 547 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 RAD51AP2Q09MP3 1159 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 MCM6Q14566 821 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 NOMO2Q5JPE7 1267 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 SPECC1Q5M775 1068 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 RRAGBQ5VZM2 374 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 AGMOQ6ZNB7 445 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms